Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1447 ATGGTAAGCTGTCAAGATGTCATaatctcactctctctctcttccagAGTCCAAATAACTCGTTGTAGCATCCCGCGAATCTTCCATTCAACATTGGATTGGAAGAGCACATTCCATGTGGTAGAGGAGTTCGGCAGACGTAAACCCCCAATCAAGCTTCCGCTGTTACACACTCTGACTCACAGACAAAAGAAAGGCACACACACCCTCTCACGCAATCCCCGAACTTCCCCCTCCGACGCACCCACTACCTCGAAAGCCCCGAAGCCCATGTCGGTCTCGTGCGGCGTGGAGTGCGTGTTCGTGCTGGGCTGCGCGCGCTGGTTCTGGAAGCGCTGCACCTACGTGGGCACCTACGACAGCGCCACGTGGCCCCCCGCCGCCGCCGACGAGTTCGAGCCCGTGCCCCGGCTCTGCCGCCTCATCCGCGCGAACTACGAGCCCGATCTCCGGAACCCCCAGCACTGCAAGCCCGCCACCGGCTACCGGCTCAACCCGGACTGGGTCGTGAAGCGCGTGACCCACGAGGACACGCTCGGCGACGCGCCGCCGTACCTAATCTACGCGGACCACGAGCACAAGGAGATCGTGCTGGCGGTGCGCGGGCTCAACCTGGCGAAGGAGAGCGACTACAAGGTGCTCCTGGACAACCGGCTGGGGCAGCAGATGTTCGACGGCGGGTACGTGCACCACGGGTTGCTGAAATCGGCGGTGTGGCTGCTGAACAGGGAATCGGAGACGCTGAAGCGGTTGTGGGTGGAGAACGGGTCGGAGTACGGGATGGTGTTTGCGGGGCACTCGCTGGGGTCCGGGGTGGTGTCGCTGTTGACCATTTTGGTTGTGAACCACAGGGACCGGTTGGGAGGGATTCCCAAGGACAAGATTCGGTGCTATGCCATTGCTCCTGCTAGGTGTATGTCCCTCAATTTGGCCGTCAAGTATGCCAATGTCATTCATTCTATTGTTTTGCAGGATGATTTCTTGCCAAGAACGGCCACTCCGTTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCTTATTATTCTTGGTCTGCCTGAGAGACACCTTCATACCGGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTCTATGCACCTGGACGAATGTACCATATTGTGGAGAGAAATTTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCCGAGAAAGCCTTACAATTAATGAAGGATCAGAGCTCCGAAACTGTGACAGTCCCTCCAACCGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAGCACAGAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACTCTGCAGAGAAAGAACCGTCTGAGAACAATGAAGGTGAGACATCCGGTAGTGCAAGCAAAGACGTCTCAAGCACCCATTCAAAATCTAGTGGTGGAAGGGCAAACTGGGATGAGGTTGTTGAAAAACTCCTAAAGAAGAATAAGACCGGAGATCTAAACCTGGAAAGGGATAACAATGTCACACAATAA 1623 0.5274 MVSCQDVIISLSLSSRVQITRCSIPRIFHSTLDWKSTFHVVEEFGRRKPPIKLPLLHTLTHRQKKGTHTLSRNPRTSPSDAPTTSKAPKPMSVSCGVECVFVLGCARWFWKRCTYVGTYDSATWPPAAADEFEPVPRLCRLIRANYEPDLRNPQHCKPATGYRLNPDWVVKRVTHEDTLGDAPPYLIYADHEHKEIVLAVRGLNLAKESDYKVLLDNRLGQQMFDGGYVHHGLLKSAVWLLNRESETLKRLWVENGSEYGMVFAGHSLGSGVVSLLTILVVNHRDRLGGIPKDKIRCYAIAPARCMSLNLAVKYANVIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERNFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKDQSSETVTVPPTVQKFERLKTIEKEHRDALERAVSLNVPHAVDSAEKEPSENNEGETSGSASKDVSSTHSKSSGGRANWDEVVEKLLKKNKTGDLNLERDNNVTQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1447 540 Pfam Lipase (class 3) 197 332 IPR002921 GO:0006629
Ssu9g1447 540 Gene3D alpha/beta hydrolase 125 341 IPR029058 -
Ssu9g1447 540 SUPERFAMILY alpha/beta-Hydrolases 130 333 IPR029058 -
Ssu9g1447 540 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 91 537 - -
Ssu9g1447 540 MobiDBLite consensus disorder prediction 468 515 - -
Ssu9g1447 540 CDD Lipase_3 131 330 - -
Ssu9g1447 540 MobiDBLite consensus disorder prediction 70 90 - -
Ssu9g1447 540 Pfam Lipase 3 N-terminal region 97 157 IPR005592 GO:0016042
Ssu9g1447 540 MobiDBLite consensus disorder prediction 63 90 - -
Ssu9g1447 540 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 91 537 - -
Ssu9g1447 540 MobiDBLite consensus disorder prediction 489 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1447 Ssu-Chr9 49658628 49661767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1447 91 433 Miscellaneous Gene Families AT5G37710 75.510 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1447 - - gmx:100798831 800.431