Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1442 ATGCACAGCCTCTCTCTTACTAGCCTTTTGCTAAAAAATGCGAAATCGCTGTGCTTTCTTCAGGGCAAGGCTATTGAACCTGACGAGCTTCTTCGATCTTTACTACTTCCTGGGGCGAAACAATCTCACTTGGATGTGCAAAGGATTGCAGTCAGATGCCTTGGCCATTTTGGACTTTTGGAAAGGAAACCAAGTGCTGAACTTTTGAAACAGTTGAGGATTTCATATATTAAGGGGCCACATTCAATTAGTATAGAGGCTTGTAAAGCATTAATTGATCTTGTGATGTGGCATGGTCCTCAAGAAGTTGACAAGGTGTTACAGCTCAATATTCCATGCCAAATAAACAGTGAGAAGACGACTTTTTGTCCTGTGAACTTTTCTGATTCAGAATGCGATTTAGATGTTGAGACGCTTGACATGTTATATGGCGGCTTTGAAAATGATGACTGGGCGAGTCCTTTACCTAGCAACGAAGATGAGTGCGTTCATGCTATACTTGGAGAGGGGTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCGGCTTCTTTGCATCCTGTTCTTTTATCAAAGCTCATTTACTTGTATTTTGGTGACGTGTCAGAACACCTGCACAGGCTGAAGCAATGCTTATCTGTTTTCTTTGAGCTTTACCCATGTCTCTCAGCCAATCATAAGAGGAGCATAACGAAGAGTTTCATTCCAGTAATGCGTTCAATGTGGCCAGGAATTTTTGGAAATTCTGCGGGTTCTTCTTTTATGGTGTCTCAGATGCGTAAGCGTGCTGTTCAAGCTTCCCGTTTTATGCTGCAGATGGTGCAGATTCCCTTATACATTAAAGAGACTCAACCAGATTGTGAAAATACTAGCACGGAACATCCACAAGTCATAGATAGTTATGCAGAAGTTCCATTTGAATGTGGTGAGGAGGGGCTTGCACTACGCATAGCCGTAGAGGTGGCAAGCTTTCAATCGAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCTTTATGTAGAATACTTGTTTTGCTTCATTTTCGGATATCAGAACAAGGGCCAATAAAATTTATGAGGAGGGTTTTATATCGCGTGGTTGAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTGAAACGCATGGCTGAACGTCTCATGACAGTAGATAGGCAACCAGATCAGCAATTGTTGCAAGATGAAGTTAATCTTATTTTggGGAAATTGGAACTTGACTGCGACCTGGATTTGGACGGTTCTGTTTTAATGCCACAAACACCAGCTGCACCCCCAACTAGGCCCACACGTTCTAGGAGAAGGGTAAGGATTGAGGAAGATAGTTCTGATGAAGGTTCACCTTCTGTGGTTCCTACCACCCATCATACTGTAAAAAGTCGCTCACAGAGAGCAAGCAAAACGGCAGCAATGAGCAAGATGTCTTCTGCCTGTAGATCGCTCAAAATTGATGAAATGGAAGAACTAGAGGAAGAAGACTCTGATGTGACATCTGAAGATTCTGACACATCCGATCAGTAG 1548 0.4244 MHSLSLTSLLLKNAKSLCFLQGKAIEPDELLRSLLLPGAKQSHLDVQRIAVRCLGHFGLLERKPSAELLKQLRISYIKGPHSISIEACKALIDLVMWHGPQEVDKVLQLNIPCQINSEKTTFCPVNFSDSECDLDVETLDMLYGGFENDDWASPLPSNEDECVHAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFGDVSEHLHRLKQCLSVFFELYPCLSANHKRSITKSFIPVMRSMWPGIFGNSAGSSFMVSQMRKRAVQASRFMLQMVQIPLYIKETQPDCENTSTEHPQVIDSYAEVPFECGEEGLALRIAVEVASFQSKKTAAEKAYVSALCRILVLLHFRISEQGPIKFMRRVLYRVVECVSSEKDLVKELKRMAERLMTVDRQPDQQLLQDEVNLILGKLELDCDLDLDGSVLMPQTPAAPPTRPTRSRRRVRIEEDSSDEGSPSVVPTTHHTVKSRSQRASKTAAMSKMSSACRSLKIDEMEELEEEDSDVTSEDSDTSDQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1442 515 PANTHER CONDENSIN COMPLEX SUBUNIT 3 1 501 - -
Ssu9g1442 515 MobiDBLite consensus disorder prediction 455 484 - -
Ssu9g1442 515 MobiDBLite consensus disorder prediction 495 515 - -
Ssu9g1442 515 MobiDBLite consensus disorder prediction 425 515 - -
Ssu9g1442 515 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 1 501 IPR027165 GO:0000796|GO:0007076
Ssu9g1442 515 Pfam Nuclear condensing complex subunits, C-term domain 3 351 IPR025977 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1442 K06678 - gmx:100817677 849.736