Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu9g1433 | ATGGCCTCTCTATCCGACAACTTCAACTCCCCCTCTCCCTCTGCGCAAGTCCAGGTGTTGAACATCAACTGGTTTCAGAAACAGCCCAACGTCAATGGCGAGGTCAGCATGACATTGAATATATCAGTAGATATGCAGTGCCTTTTCACATGGAACACAAAACAGGGTTTTGTTTTTCTAGCTGCTGAGTATGAAACTCCAAAGAATTCCTTGAATCAGATATCTCTATGGGATGGTATCATTCCCTCTAAAGAGCATGCAACGTTTTGGATTCATACATCAAATAAGTACCGCTTCATTGTCCAGCAATTTGCGTGGCAAAGAATATAA | 330 | 0.4242 | MASLSDNFNSPSPSAQVQVLNINWFQKQPNVNGEVSMTLNISVDMQCLFTWNTKQGFVFLAAEYETPKNSLNQISLWDGIIPSKEHATFWIHTSNKYRFIVQQFAWQRI | 109 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu9g1433 | 109 | PANTHER | SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 | 1 | 102 | - | - | |
| Ssu9g1433 | 109 | Pfam | Signal peptidase subunit | 4 | 100 | IPR007653 | GO:0005787|GO:0006465|GO:0016021 | |
| Ssu9g1433 | 109 | PIRSF | SPC3 | 1 | 107 | IPR007653 | GO:0005787|GO:0006465|GO:0016021 | |
| Ssu9g1433 | 109 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 | 1 | 102 | IPR007653 | GO:0005787|GO:0006465|GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu9g1433 | Ssu-Chr9 | 49345202 | 49346820 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu9g1433 | K12948 | - | gmx:100306631 | 190.66 |