Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1423 ATGGAGCCAGACTCGGAATTCCCAATCGAATTGCGATCGAAAGCGTTCGAAGTCCTAAGCTCAAACGACAACACCGCAATGGAAACCCTCTTCTCCCACCTCTACTCTCCCCAACACCAACACCGATCCCAGGCACTCGCGTTCCTCCAATGCTGCAAGCACTACCACCCCGATCTCCTCTTCATCAAACTCTTCTTCATCCTCCGCTGCACCCCCCTCCCCGAAACACGCGCCAACGCCGCACGCGCTCTCCACTTCCTCCAACCCTCCCACCTCTGGCCCAAGCTCCGGCCACTCGCCCAGGCCCGCCTCAAGGCCCACTTCCTCACTTTCCTCGCCGAAGAACCCTCCATCCACGTCCTCCGACTCGCCTCCCTCGTCCTCGCCGAAACCGTTTCCGTTACCTACAAAACGCACCAAAACTGGCCCGAGATTCTCGACTTCCTGCTGTCGTCTATCGCCTCCAACGACGACAAGTCCCGCGAGGTAGCTTCTCTGGTCTTCGCGAAGTTACCCAACGACTGCCGTTTTCTCGTCTCCAACGCGCTCCGCGAGAAGCACGACGCCGTCCGCGTGCTGCACTCGTCGTTTTTGAGCTCCCTCGCGTCGTCCAACCCTGACGTTCAGGTCGCGTCTTTTGGAGCGGCCGTGAGTCTCGTGCGCTTGTTCTCCGAACCGTCGTTGTTCCACGAGCTCCTGCGCGCGATCATGGTCGGCGTTTTCACGCTCCTGCATGGATTCGAAGGAAGCTATTTCCGAAGCGCGTTTGCGGAGTTGGTAAATCTGGTTTCTCAAGAGCCTCTACTGTTAAAGCCTTATATGAACGATATGGTTCTCGACGTGCTTCAGATCGTGGAGAGCGATAGTTTGAGCAAGGAAACGCACTGTTTGGCGTTTGAATTGGTGATGGCCATGACGGAGGTGAAGGAGTACGACCACGTGTTTGTTAACCTTCCTTACACGACTGTGCGGAGGTTGTTCTTTGTTTCGACGAAGATGCTGCAGTGCGTTGCGGAGGATGGGGGTGGTGGTGAGCGTGAATTGGAAGGAGAGGAGGTTGTTGATGTGTACGGATTTGGAATGAAGTGCTTGAAGAAGCTTTGTGTCGCACTCGGAGCCAGTAAAGCGGTGTCCGTTGCGTATGAAGTATTGCGGCTTCACTTAGATGATACGGAATGGAAGATGCGCCATGCAGGAATTACGATGCTGAATGTGATCGCAGAAGAGTTCTCCGACGAAATGGTATTGATGGAAAATTTTCTAGGTGAAGTGGTGACCAAAGTTTTGAAGTCAATCCAAGACTCCCATGTTCAAGTTCGGTTGGCAACTTTGAAATTTATGGAGACTCCTACAAACTTTGTTCAGGTGGTGCAAATCCTTTACCATCATAGGCTTGTGCATGCTTTTTGCATGGCACTTGACAATGATCAGGACCATAAAGTGAAGGAACAAGCTGCCTCAGCAATGCTATTCTTTCTAAAGAACACTTTGCCAGAAAGCTTAACACTGAACAAGAATGTGGATACTGTAATGAGCAAATTGTTGTCATTGCTTCAGGAGGCAGCACGGGGAATTCGAATTTGTGCAGAGCTTGGAACACCGCAGTTGAAGCCTTTTGTCAATAGAATATTGTCAGAACTCAGTGTTTTGATGAACGATCCAAATCGCTCACTTCCAGAGAATGCAAAAGCGCATGATATTGCCGTTTCAGCTCTAGGAAGAATTTGTGAGTTCCATCGTGAATGCATTGATGGCTCCCagATGGTTCCAGTCTGGCTAAGTTTCTTGCCACTCAGAAATGATTTGATTGAAGCCAAAGTTATGCATGAACAACTCTGTTTAATGGTTGCAAGattAGATAAGGATCTTTTAGGAGCTGGTTATCAAAACCTTGTCAAGATTATTGTAGTGTTTCTTGAGTTATCATATGCAGTAAGGTTTAGGACTTTGTTTTCTGCAATCCTCCTTGCCATATAA 1977 0.4962 MEPDSEFPIELRSKAFEVLSSNDNTAMETLFSHLYSPQHQHRSQALAFLQCCKHYHPDLLFIKLFFILRCTPLPETRANAARALHFLQPSHLWPKLRPLAQARLKAHFLTFLAEEPSIHVLRLASLVLAETVSVTYKTHQNWPEILDFLLSSIASNDDKSREVASLVFAKLPNDCRFLVSNALREKHDAVRVLHSSFLSSLASSNPDVQVASFGAAVSLVRLFSEPSLFHELLRAIMVGVFTLLHGFEGSYFRSAFAELVNLVSQEPLLLKPYMNDMVLDVLQIVESDSLSKETHCLAFELVMAMTEVKEYDHVFVNLPYTTVRRLFFVSTKMLQCVAEDGGGGERELEGEEVVDVYGFGMKCLKKLCVALGASKAVSVAYEVLRLHLDDTEWKMRHAGITMLNVIAEEFSDEMVLMENFLGEVVTKVLKSIQDSHVQVRLATLKFMETPTNFVQVVQILYHHRLVHAFCMALDNDQDHKVKEQAASAMLFFLKNTLPESLTLNKNVDTVMSKLLSLLQEAARGIRICAELGTPQLKPFVNRILSELSVLMNDPNRSLPENAKAHDIAVSALGRICEFHRECIDGSQMVPVWLSFLPLRNDLIEAKVMHEQLCLMVARLDKDLLGAGYQNLVKIIVVFLELSYAVRFRTLFSAILLAI 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1423 658 SUPERFAMILY ARM repeat 23 638 IPR016024 -
Ssu9g1423 658 PANTHER BETA-3, PUTATIVE-RELATED 518 641 - -
Ssu9g1423 658 PANTHER BETA-3, PUTATIVE-RELATED 17 520 - -
Ssu9g1423 658 PANTHER IMPORTIN BETA 518 641 IPR040122 GO:0006606
Ssu9g1423 658 Gene3D - 17 519 IPR011989 -
Ssu9g1423 658 Gene3D - 520 650 IPR011989 -
Ssu9g1423 658 PANTHER IMPORTIN BETA 17 520 IPR040122 GO:0006606
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1423 Ssu-Chr9 49233645 49240965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1423 K20222 - gmx:102669706 935.636