Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1417 ATGGAGAAAGCAAGCACTAATTCTGCTTTGAAGTTTGTGAAGAACACTTCTCAGTCTGCAGCTCAATGGAGCAGTACTAATTCTAGAGGAATGACAAAAGATGTACCCAAAGACAAGTTCTATGACAAGACTAAAGCTTCACGAAGGTCTCCACCCAAAGAAAGTAACATGGCCTCACCAAGGTCTCCACCCAAAGAAAATACTAAACCACAAGAATTCAAACTCCACACCCAAGAAAGAGCTGTCAAGCGTGCAATGTTCAATTATGCTGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAACATGAGGAGAAGCTGCAAAAGATGATTGAAGAGGAAGAGGTTCGTTTGCTAAGGAAGGAAATGATTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTCTCCCCACAAAGATCAAGCAGCAGGACTGTTCCAAGAGAATCATGCCTCCACATGATGAGCAGCAAGTGCTGGAGCTGCAGCGTTGGCAATGAAATCTACAACTTGCACCACTATGGTCATCAAGCTCTCAAGCCCATTAAGTGA 558 0.4247 MEKASTNSALKFVKNTSQSAAQWSSTNSRGMTKDVPKDKFYDKTKASRRSPPKESNMASPRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKHEEKLQKMIEEEEVRLLRKEMIPRAQLMPYFDKPFSPQRSSSRTVPRESCLHMMSSKCWSCSVGNEIYNLHHYGHQALKPIK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1417 185 Coils Coil 97 118 - -
Ssu9g1417 185 MobiDBLite consensus disorder prediction 1 31 - -
Ssu9g1417 185 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 178 - -
Ssu9g1417 185 MobiDBLite consensus disorder prediction 32 50 - -
Ssu9g1417 185 Pfam Targeting protein for Xklp2 (TPX2) domain 73 145 IPR027329 -
Ssu9g1417 185 PANTHER TARGETING PROTEIN FOR XKLP2 1 178 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Ssu9g1417 185 MobiDBLite consensus disorder prediction 51 66 - -
Ssu9g1417 185 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1417 Ssu-Chr9 49096250 49099381 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1417 - - gmx:100305850 322.013