Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1111 ATGCACACTTTGTCTTCTTTCAGGAGCAGTAGTTTCAGGCGTAGTAAAATTAGTGCCTTTTTCACTAGAGGGATATTGAGGAGGTTGAAGATTATTGTGGCAGTTGGGCTTATTGTTGGCATGATTGTGGGGTTTTTGAGTGGGgtgattttcttctcttataagatTGGTGTTGAAGGGAAAGATGCAGTGATATCATTGAAATTGCATGTGGAGGAGAGCAATTATGCTGAGAGGATTGGAGTGAAGAAGTGGATGGATGAGAATGATGTTACTGGGATGGTGGATAGTTACACTACAAAGATATATGAGACTGTGTCTGATCAGATAGATGGGTTGGCTGTGCAGTATAACATGACTGAATTTGTGACTGGTATTAAGCATTTTGTGATATCAACTCCTGTTAACACTTCAGCGCCTTCAAGGGCCTTGATGACTCCCTCGCCGTATGCAGAGAAGTTCTTGAGTTTGAAGAACCGGGTTAGGAACCGGGAATGGAGCCAGATTTATGCAGAAGTTGATTCAATTTTGCGGGAGCTTGTGATCACTCGCGAGGATTTGGTTGAGAAGGCGAAAGGGTTTGCCTTCAAAGGAATTGATGTGTCACAGCGAATTTTTGCTAGTAGTAGGACTGTGCTTGGAAGCAGTACAAAGTTTGTGTTCTCCATTGCGAATTCCATAATCTCTGGAGCTGCGGAGGTTTTCAATTTTGTGTCTCAGTCGATGGTATTTATTTGGGTTTTGTATTACCTCATCACATCAGAGTCTGGTGGAGTAACAGAACAAGTGATGTACATGCTTCCAATTTCAAACTCCACTAGGGTCAGATGTGTTGAGGTTTTGGATAAGGCTATTTCAGGAGTACTTTTGGCCACTGCTGAGATTGCATTTTTTCAAGGATGTCTTACTTGGCTTTTGTTTAGGTTAAACAAAATACATTTCTTGTACATGTCAACTGTGCTTGCATTCATCAGTCCTCTCCTGCCAATATTTCCATCTTGGCTTGCAACAATTCCGGCAGCCGTGCAACTAGTGCTGGAAGGAAGATACATAATGGCCATTGTGTTGTCTGTTATTCACCTTTTTCTCATGGACTATGGCGCATCAGAGATTCTAGAAGACGTGCCTGGGAATAGTGCATATCTCACTGGGCTGAGCATCATTGGGGGAATGACATTGTTCCCATCTGCTTTGGAGGGAGCTATTATGGGACCATTAATAACTACAGTTATGATTGCACTGAAGGATTTGTATGCTGAATTTGTGTTGCAAGAACCTAAGGACACGGACAAGCAGAAAGCCAGCTAG 1308 0.4205 MHTLSSFRSSSFRRSKISAFFTRGILRRLKIIVAVGLIVGMIVGFLSGVIFFSYKIGVEGKDAVISLKLHVEESNYAERIGVKKWMDENDVTGMVDSYTTKIYETVSDQIDGLAVQYNMTEFVTGIKHFVISTPVNTSAPSRALMTPSPYAEKFLSLKNRVRNREWSQIYAEVDSILRELVITREDLVEKAKGFAFKGIDVSQRIFASSRTVLGSSTKFVFSIANSIISGAAEVFNFVSQSMVFIWVLYYLITSESGGVTEQVMYMLPISNSTRVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLNKIHFLYMSTVLAFISPLLPIFPSWLATIPAAVQLVLEGRYIMAIVLSVIHLFLMDYGASEILEDVPGNSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVMIALKDLYAEFVLQEPKDTDKQKAS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1111 435 Pfam AI-2E family transporter 217 416 IPR002549 -
Ssu9g1111 435 PANTHER TRANSMEMBRANE PROTEIN 1 429 IPR002549 -
Ssu9g1111 435 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1111 Ssu-Chr9 42761145 42763245 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1111 - - gmx:100819024 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1111 9 42761145 42763245 Ssu9g1111 9 42761145 42763245 ECH