Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1094 ATGAAGGTGGGGCTATCAAATTTTGCCACTGCGGTGGTAATCTTTTCCAGCCTGAATGCAGTGCTTGGAATCAGATTTGTGATTGACAGAGAAGACTGTTACTCTCATAATGTTCAGTATGAAGGGGATAGAGTCCATGCTTCATTTGTTGTGATCAAGATCGATACAGCTTGGCAATATACTCATGATGGTGTAGACCTTTCGGTGAAGGGACCTTCGGGTGATCCAATTCGAGATTTTCATGACACGACAAGTGAAATATTCGAATTTGTGGCTCGAAACAGGGGACCCTATCGCTTCTGCTTCACCAACAAGTCTCCCTATCATGAAACAATTGATTTTGATGTCCATTCTAACCACATTCAATTCACTGATCAGCATGCAAAAGATGAGCATTTAAATCCTTTGTTAGAACAGATAACGAAGTTAGAGCAGGCTCTTTTCAACATTCAGTATGAACAGCATTGGCTTGAGGCTCAGACAGAACGCCAGGCAATAGTAAGCAATGCAATGAGCTCTAGAGCAATTCACAAGGCCATACTTGAATCAGCAGCACTAATGGGTGCCAGCGCCCTCCAAGTTTATCTTCTTCGTCGTCTCTTTGAAAGAAAGCTTGCAATATAG 624 0.4247 MKVGLSNFATAVVIFSSLNAVLGIRFVIDREDCYSHNVQYEGDRVHASFVVIKIDTAWQYTHDGVDLSVKGPSGDPIRDFHDTTSEIFEFVARNRGPYRFCFTNKSPYHETIDFDVHSNHIQFTDQHAKDEHLNPLLEQITKLEQALFNIQYEQHWLEAQTERQAIVSNAMSSRAIHKAILESAALMGASALQVYLLRRLFERKLAI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1094 207 ProSiteProfiles GOLD domain profile. 31 118 IPR009038 -
Ssu9g1094 207 SMART EMP24_GP25L_2 23 202 IPR009038 -
Ssu9g1094 207 Pfam emp24/gp25L/p24 family/GOLD 30 202 IPR009038 -
Ssu9g1094 207 Coils Coil 197 207 - -
Ssu9g1094 207 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 2 205 - -
Ssu9g1094 207 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2 205 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1094 Ssu-Chr9 42517623 42520013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1094 - K20347 gmx:102665223 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1094 9 42517623 42520013 Ssu9g1094 9 42517623 42520013 ECH