Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1088 ATGTCTCTTGGGTATGCCGAGAAGCTCTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATACTTCGACCCATCTCACCTTTTGCGCGAGAAAATAGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCTCTGCCATTTCATCGTGCAGCACCAAGCTTGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGACGGTCTTCATCTTCGATCTGGAATACCAAGGGAGAAACTAGCTGAATTGCATGGGAATTCTTTCATGGAGACATGCCCATCTTGTGGAGCAGAGTACTTTCGTGATTTTGAAGTAGAAACTATCGGTTTAAAGGAGACATCAAGGCGTTGTTCAGTTGCAAAATGTGGGGCAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTCCGAAGGAGATGAATCCTGCTGAGAAACACTGCAAACAGGCAGATATAGTGTTATGCTTGGGGACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTTTAAAAGCACTTCGTGGTGGGGGTAAAGTTATCATTGTAAACCTCCAGAAAACTCCAAAGGACAAAAAAGCCTGTTTAGTCATACATGGGTTTGTGGACAAGGTAATTGCGGGTGTCATGGACCAGCTTAGTATGCAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGCAATGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAGAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTACAAAGCAGCAATTCTGGACAAGCAACCGTTTCGGCTTAAAAGGAGAACGGCATATAATAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCGGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGATTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGGTGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCAAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGCCCTTGATTCTCTAAGTAATGGtgatcttaaaaaaagaaaagcaagtgTGACTGGTACAGGATCATCTAGGAAGCGTTCAAAAGGGCCCTCCAAGTGTAAATCTAGATCAGAGAATATTAGGGGTTATATGTAG 1440 0.4201 MSLGYAEKLSYIEDVGNVGMVEYFDPSHLLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSVAKCGARLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVIIVNLQKTPKDKKACLVIHGFVDKVIAGVMDQLSMQIPPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQRAALPFIKSVEISFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNAVIERKTILTPRSDVTTYAIVTNVVQYSKTCKAALDSLSNGDLKKRKASVTGTGSSRKRSKGPSKCKSRSENIRGYM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1088 479 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Ssu9g1088 479 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Ssu9g1088 479 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Ssu9g1088 479 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 469 - -
Ssu9g1088 479 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Ssu9g1088 479 Gene3D YEATS domain 270 380 IPR038704 -
Ssu9g1088 479 Gene3D - 135 184 - -
Ssu9g1088 479 Gene3D - 36 262 - -
Ssu9g1088 479 MobiDBLite consensus disorder prediction 448 479 - -
Ssu9g1088 479 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 469 - -
Ssu9g1088 479 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1088 Ssu-Chr9 42435183 42448038 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1088 K11416 - gmx:100803586 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1088 9 42435183 42448038 Ssu9g1088 9 42435183 42448038 ECH