Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1078 atgaaagaaaagaaaaaaccttCTAAAACATCATCTACAAAGAAAGAATCTgctaagaaaagtaaaattgagaaaattacgGTTGCAAATAAATCTCGCTCACCACCAAAAAGAACACCTAGGAAATCATCATCTAACTTCTCAAAGTCTGATGATGATAGTGATGAAAGTCCCAAAACAAAGGTCTTttcaaggaagaagaaaaatgagaaaggtgGAAAGCAGAAGACATCGACACCAACTAAGTCTGCCTCCAAAGAGAAAACTGAAAAGGTTACGAAAGGAAAAGGCAAGAAGAAAGAGAAGCCGAGCCCCAGTGATAATCAGTTGCGTGATGCGATTTGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACTGACATTCTGAAGCAACTTGctaAACAATATGATATGGATCTTGCCCCGAGAAAGGCATCTATAAAGCTCATGATTCAGGAAGAGCTGACAAAACTAGCTGATGAAGCAGATGATGAGGACGGAGAAGAGGATGCTGAGAAAGAAGAAGCCCCATCTACAGGCCAGGAGGTTGAAGCCTGA 567 0.3527 MKEKKKPSKTSSTKKESAKKSKIEKITVANKSRSPPKRTPRKSSSNFSKSDDDSDESPKTKVFSRKKKNEKGGKQKTSTPTKSASKEKTEKVTKGKGKKKEKPSPSDNQLRDAICEILKEVDFNTATFTDILKQLAKQYDMDLAPRKASIKLMIQEELTKLADEADDEDGEEDAEKEEAPSTGQEVEA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1078 188 MobiDBLite consensus disorder prediction 81 110 - -
Ssu9g1078 188 MobiDBLite consensus disorder prediction 1 110 - -
Ssu9g1078 188 PANTHER BNAC09G32300D PROTEIN 2 181 - -
Ssu9g1078 188 SUPERFAMILY DEK C-terminal domain 99 158 - -
Ssu9g1078 188 MobiDBLite consensus disorder prediction 162 188 - -
Ssu9g1078 188 MobiDBLite consensus disorder prediction 1 27 - -
Ssu9g1078 188 Pfam DEK C terminal domain 105 158 IPR014876 -
Ssu9g1078 188 PANTHER DEK PROTEIN 2 181 IPR044198 GO:0003677|GO:0006325
Ssu9g1078 188 MobiDBLite consensus disorder prediction 162 176 - -
Ssu9g1078 188 Gene3D - 97 160 - -
Ssu9g1078 188 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1078 Ssu-Chr9 42215527 42217780 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1078 K17046 - gmx:100818537 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1078 9 42215527 42217780 Ssu9g1078 9 42215527 42217780 ECH