Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1044 atggcatttcaattttttgctcTGGGTCAACCAGTCTTCAAGTTTGATTCAAGGGTACTCTGCACTGAGCATGAGAATTGGCCAGAGAGAATGTCCACTAAGGCTTTGGCCAAGAACAGTGGAATACTACTGCCATTGGTACCAAAGGGTGAGTCTAAGTTGCCTAGCATAAGTGGCTTGAAATGTTTGGGTGGAAGTAGTGACAGTTTCAAAGGAAACAATAATGTTTCCAAAGGGAATTTGAACTTTGTTCTTGAGTTACTGAAGAAGAGGATGGGGATCATTCTGGCCGCAACTGTTTTTGGGGTGGTGTTGGTTGGATGTCCACAAGCCTTGGCTGTAGAAGGTGTGCTGACTATTGTGGAGCAGAGCAAAATGTTTCTTAGGAATGCATGGTCCAAAGTGTTGCCAGTTCTTAGGATATTTAAGGAGCAAGAGTTGGTACTGGCTGTACTTTTGGCTCTTTCTGCTTTCTTCTCAATGGCAGAGACTTCGATTACCACACTTTGGCCTTGGAAGGTTCGTGAGTTAGCTGAAAAGGAGTCTGGAAATTTCGTTTTCAAACTACTCCAAAGAGATGTGACCCGTTTCCTTACAACCATACTTATTGGCACAACTGTGGTTAATATTGGAGCAACAGCTCTGGTCACAAAAGCTGCAACTGCTGCATTTGGTGAAGCTGGTGTTAGTGCAGCAACTGGAGTGATGACCGTTGCCATTTTGCTTCTCACTGAGATCACTCCAAAAAGTTTTGCAGTTCATAATGCCATAGATGTGGCTCGGTTAGTGGTCAGGCCAGTGGGCTATCTTTCCCTATTCTTGTATCCTGTAGGAAGAGTTGTTACATATCTCTCAAAGGGGATACTGAAATTGCTTGGCGTAAAGGGAACAAGAGAGCCATATGTTACCGAGGAAGAGCTAAAATTGATGGTAAGAGGAGCAGAATTAAGCGGGGCAATAGAGGAGGAAGAACAGGATATGATTGAAAATGTGCTGGAGATAAAAGTAACACGAGTTGCGGAACTAGTTACTACTCCTGTTCAATAG 1047 0.4288 MAFQFFALGQPVFKFDSRVLCTEHENWPERMSTKALAKNSGILLPLVPKGESKLPSISGLKCLGGSSDSFKGNNNVSKGNLNFVLELLKKRMGIILAATVFGVVLVGCPQALAVEGVLTIVEQSKMFLRNAWSKVLPVLRIFKEQELVLAVLLALSAFFSMAETSITTLWPWKVRELAEKESGNFVFKLLQRDVTRFLTTILIGTTVVNIGATALVTKAATAAFGEAGVSAATGVMTVAILLLTEITPKSFAVHNAIDVARLVVRPVGYLSLFLYPVGRVVTYLSKGILKLLGVKGTREPYVTEEELKLMVRGAELSGAIEEEEQDMIENVLEIKVTRVAELVTTPVQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1044 348 Pfam Cyclin M transmembrane N-terminal domain 148 324 IPR002550 -
Ssu9g1044 348 PANTHER BNAC03G73630D PROTEIN 66 345 - -
Ssu9g1044 348 ProSiteProfiles CNNM transmembrane domain profile. 138 324 IPR002550 -
Ssu9g1044 348 PANTHER HEMOLYSIN-RELATED 66 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1044 Ssu-Chr9 41328025 41341852 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1044 - - gmx:100778907 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1044 9 41328025 41341852 Ssu9g1044 9 41328025 41341852 ECH