Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1036 ATGTACAACAAGTGGTTTTTAGAAGAAACAGGTTCAACTGGAAAAAGCCTATCAGACCTTTCTGACATTCTGAAGACAAATAAAGGGATCAAAGAGATTATGCTTTCAGAATCAGGCATAGGGTCTGTTGGGGCAGGACTCATTGCTTCTGCTCTTGTGGTGAATGACAGTTTGGAGGAGCTACAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACTCAACTCTTAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCTACCCCTCTTATATCTGCAGTTTTGGCAAGGAACAGAAGAATGGAAGTTCATGTTTGGAGTGGGGAAAAAAATGGGGAAAAGAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAGCACGCTTAGAATTTACAAGCTTAACCTCTCAGGTGCTTGCAGGGTCACTTGCTCTTTAGGAATGAACCTCACAGTCAAATCGCTTGACATGACCGGAGTCAAGCTAAAGTCCCGGTGTGCCAAGGAATTTAGGTGGGTTTTAGAACAAAACCAAACCCTCAAAGAGGTAAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGACTCTTTAGGAACAGAAGTCTACAAACCTTACATCTAACTGGAAATTGGTTCGGTGGAATTGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAAATGCAAGCCAACACTACTTTGACATGTGTTACCTTTGGTGGAGGGAGAACAAGAATAGGAAGGGATGGTCTAGCTGCTATTATACAATTTCTTATAACCAATGAAACAGTGAGGCAGCTGGGGATTCATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAGTGCTTATCTCTGCAAGGATGCAAATGTGTGCAGGGAGAGACAGTGCTGCAGACAATTATGGAGACACTACAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACACAACTCTGGAAAGACTCGGGGGATTTATCAAAGATTGGGCCAGAATGAGAAGACTGAACCAGAAATGGATTTGCTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACCACACTCTGTCATTCaatatctcaaaatttctctGCTTCGTCGCTTCCCTACTTGGACCAAGTCAGAACAATAGTGAACCCAGTGGAGCAGGCTGTGAAAGCAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCAGCATGAGTTTTTGTCCCTCCATGATCTTATGTTCCCAGGGCATGGGAGCGCATCATTTTTCGTCATCATATCAAGTTTATTCAGGAAACCAAATAACAAAGAACCAAAAAGCTCAACTGAAATTGAAGAGGACCTGCAGTACTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGGGCAATACAACAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTTTGACAAAATCAACCAACCATCACAAAATTTGCAGCACACAGTAGATTCAATTCAGAGACTGAGAGACAAGTTCCAAGGCTTTGTTGATTTCTACCCAACTGTATTTACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCACAAGTATATCAACTTTGCAATGATCTAATACAGATTTTATCAGACTGGAGATCCGAGAACTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTTAGAGTCCCACCTTTGAGAATCCGATCAAGACATGACAATAAAGAGAGGGTGGAAATGAGGAGAAGAGCTGTTGCTACCTGTCTTCACCATATTGGTGAGGTGATCTACTTTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAATAGTGGATTTATTAGCAGGAAGGAACTGGAAAAGATCTTAAGAGGAAGTTTACAGAGCCCTATTCCTGGTATGGGTTCAAAGGTGTTTGAGAACTTGGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGCTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAAGTGGCAGCTAAGCATGCCAGACTGCGTTTATACTGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACCCCAGGATTCTTCCCTCGTTTACAAGTGCACCTTCACAACAGAATAATGGCTCTAAAGGATCAACATGGGGCAACTTACAGTCTTGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGAGGACAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCATCAACTTATAATCCCCGCAATCCAAAGCGTTTGCCATGGGATCACCTTGACTGAAAATGTCATAAGACCTGACTGTGTGAGAAAACTGACACCCCCTAGATATAGAAAAACTCAATTTGCTTCCCTGCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGACAGCATGTATGATTATCAACACACATGGAGTCCGGTCCTAGACTCAGGTAGGCCTATTCTCCAAGATGGATTTGATCTTGCGCGAGACCTTTTATCCGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATCACGACCTATACAATCTTGCACAAGAGCTGCAAATCTCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGTGATGAAACTGAGAAGGTTGAACCAAGCTTTGGTGGCATTGCAAAAGGGGTTGAAGCAGTGTTACAAAGACTCAAGATTATTGAACAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATACTATGAACATAGACTTCTCCTTGAGCTTCATTGCAAAGTGAACCACCTAGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATCTATTTTGTGAAGACAGAAAACTACACAAGGAGACTCGTCACCACCATGCTTTCTGGCATGACTGCTCTCCGGCTTCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGGTGTGAAATCATGCAAGTCGATAACGTGGCTGTGAAGTGTTTGGCTCCATACATGAAGAAGTTCATGACACTTGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGGATGGGGCAAATGATACCAGACTTGGGCAAGGAGGTGGCTCATTTGGCTGGCTCTTCAGTTCTCTTTGGTGCAGCTGGGGCAACAGCAGCTGGTGTTGCAGGGGCAGCCGCTATGGGTCGTAGAAATAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGATTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGGAGGTGCTCCTCAGGGAAGGATATTGCAGAGAAGTTTGGACTGTGGCGAGTAAGGTACAGGGACAATGGTCAAATTGCATGGATATGCAGGAGGCACATATATGCCAGATCAGCAGAGATAGTTGAAGTGCCTGTTTGA 3834 0.4278 MYNKWFLEETGSTGKSLSDLSDILKTNKGIKEIMLSESGIGSVGAGLIASALVVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRRMEVHVWSGEKNGEKSSKVVEFVPENSTLRIYKLNLSGACRVTCSLGMNLTVKSLDMTGVKLKSRCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFRNRSLQTLHLTGNWFGGIGVEHLLCPLSRFSALQMQANTTLTCVTFGGGRTRIGRDGLAAIIQFLITNETVRQLGIHDDESLRSDDFVKIFKSLEKNASLKCLSLQGCKCVQGETVLQTIMETLQINPWIEDIDLSRTPLHNSGKTRGIYQRLGQNEKTEPEMDLLKDMPLTEPKSCRVFFCGQECAGKTTLCHSISQNFSASSLPYLDQVRTIVNPVEQAVKAVGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFVIISSLFRKPNNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHFDKINQPSQNLQHTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPQVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVRVPPLRIRSRHDNKERVEMRRRAVATCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHSSENSGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQKWQLSMPDCVYTGRHLECDDSSHMFLTPGFFPRLQVHLHNRIMALKDQHGATYSLEKYLISISINGIYIRVELGGQLGYYIDVLACSTKNLTETLRVIHQLIIPAIQSVCHGITLTENVIRPDCVRKLTPPRYRKTQFASLQQLKQALLSLPADSMYDYQHTWSPVLDSGRPILQDGFDLARDLLSDDDFREVLHRRYHDLYNLAQELQISPENNPEGQGQSITLSDETEKVEPSFGGIAKGVEAVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHCKVNHLATFNVQVEERKVPNMIYFVKTENYTRRLVTTMLSGMTALRLHMLCEFRGQMHVVEDQMGCEIMQVDNVAVKCLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLGKEVAHLAGSSVLFGAAGATAAGVAGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERRCSSGKDIAEKFGLWRVRYRDNGQIAWICRRHIYARSAEIVEVPV 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1036 1277 SMART LRR_RI_2 216 243 - -
Ssu9g1036 1277 SMART LRR_RI_2 55 82 - -
Ssu9g1036 1277 SMART LRR_RI_2 188 215 - -
Ssu9g1036 1277 SMART LRR_RI_2 27 54 - -
Ssu9g1036 1277 PANTHER PROTEIN TORNADO 1 14 1266 - -
Ssu9g1036 1277 Pfam Leucine Rich repeat 187 208 IPR001611 GO:0005515
Ssu9g1036 1277 Pfam Leucine Rich repeat 216 237 IPR001611 GO:0005515
Ssu9g1036 1277 SUPERFAMILY RNI-like 15 115 - -
Ssu9g1036 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 591 IPR027417 -
Ssu9g1036 1277 Pfam Ras of Complex, Roc, domain of DAPkinase 392 519 - -
Ssu9g1036 1277 SUPERFAMILY RNI-like 143 358 - -
Ssu9g1036 1277 Coils Coil 1024 1051 - -
Ssu9g1036 1277 Gene3D Ribonuclease Inhibitor 249 378 IPR032675 -
Ssu9g1036 1277 Pfam C-terminal of Roc, COR, domain 657 823 IPR032171 -
Ssu9g1036 1277 Gene3D Ribonuclease Inhibitor 6 123 IPR032675 -
Ssu9g1036 1277 Gene3D - 390 594 IPR027417 -
Ssu9g1036 1277 Gene3D Ribonuclease Inhibitor 124 248 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1036 - - gmx:100817598 2347.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1036 9 41141710 41146433 Ssu9g1036 9 41141710 41146433 ECH