Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1029 ATGGGTTTCTCGGTTGCGGCTTCTTTGGGTGCCCATGTCGTGCTGAGAGACACTCATGAAACAAGAATCAAGTGCCAATTTTTGTGCAGAAAAGAACAGAATAATGGAATTGGTTTCAAGTTCTCAAAGCAAAGGGCCAGTCAAAGAGCAATTTTTGTTAGCAAGCAAGAGTTCAGTGAGTTGGATGAGAGGAAGAGCCCGGACGAGGTTAGAGAAGAGATTAAGAAATGTTATGAACTCATAAACAGATTAGGGAGAGGAGTTGTGTATCTGGGTTCTTCAAGGATGGGGCCTGGCCATTCACATTATGTGCAAGCACAAGGGCTGGCTAAAGAGGCAAATGAGGTGTTTGAGATACTGGCATTGATTCAGCTGGAACGGATTGGATCACAGCTTCCTGTTCCCTTCCTGTTGATGAACTATGATTCATTTTACTCAAAGCTGCTCGACTTTTTAAATGATTGTGAGGGTTGGGGAACTGTCTCTAAAGGAGAGGTTGCATCATTCTGGAAGGTTTGTAACAGCAACTCAGAAGCTTTGGCGTACCTGGAAGATTTCTATTGCATTTCTTCTAGTGACAAAAAACATGACAATGAAGTAACTGACTTGCACCGTATGTCACCCCAGTCTACGGTTAGGAAGCTTTGCCTACGTGGGATGTTCAAAAAGTTGCCAAATTGGATTCCGGGGCTTCAAAATCTTGTGAAATTGTCTTTGATATACTCCATGTTAACTCATGATCCGCTGGAATCACTAAAAGATCTCAAGAATTTCTGTAGTCCACTGGAATTCCGTGGAAAATCTAGGAAATGA 813 0.4256 MGFSVAASLGAHVVLRDTHETRIKCQFLCRKEQNNGIGFKFSKQRASQRAIFVSKQEFSELDERKSPDEVREEIKKCYELINRLGRGVVYLGSSRMGPGHSHYVQAQGLAKEANEVFEILALIQLERIGSQLPVPFLLMNYDSFYSKLLDFLNDCEGWGTVSKGEVASFWKVCNSNSEALAYLEDFYCISSSDKKHDNEVTDLHRMSPQSTVRKLCLRGMFKKLPNWIPGLQNLVKLSLIYSMLTHDPLESLKDLKNFCSPLEFRGKSRK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1029 270 SUPERFAMILY MCP/YpsA-like 114 187 - -
Ssu9g1029 270 Gene3D - 113 187 - -
Ssu9g1029 270 PANTHER EXPRESSED PROTEIN 114 197 - -
Ssu9g1029 270 PANTHER EXPRESSED PROTEIN 114 197 - -
Ssu9g1029 270 PANTHER EXPRESSED PROTEIN 1 112 - -
Ssu9g1029 270 Pfam Possible lysine decarboxylase 114 182 IPR031100 -
Ssu9g1029 270 PANTHER EXPRESSED PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1029 Ssu-Chr9 41016486 41023047 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1029 - - gmx:100803538 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1029 9 41016486 41023047 Ssu9g1029 9 41016486 41023047 ECH