Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1021 ATGTGGCACTTCATGGCTCTCTATCGTGTACTTTCTATACTCATTCTTCAGTACTCATTGGTAGCACTGGCTTCTTCATCACCACTAGGTGGCTGGAAAACATTGCAAGAATCTCCACCACTGGTCATAGCACGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGTTTACTTGCCTATAATTTGGCACTAGAAACTAGTGGACCAAATGTCACTCTATGGTGTGATGTGCAATTGACTAAGGATAAGGTTGGGATTTGTTTCCCTGAGCTCAAGCTGGACAATGCCACTGACATTTCCGTTGCTTACCCTGGCAAGGCAAAGGATTACTCAGTTAATGGGGTCTCAACCCGGGGATGGTTTTCTGTGGATTACAACTTTGATCAACTAGCAAATGTATCTCTTGTTCAGGGAGTGTACTCTCGGAGTAATAAGTTTGATGGCAACGAGCTTCACATTCTCACTGTTAAAGACGTAGCTAAGTTAATAAAATCACCATCTACAGGCCTGTGGTTAAATGTTCAGCATGATTTATTCTTCAAGCAACAGAATTTGAGTGtagaaatttttctacaatCTCTCTCTGCTAAAAGTGTATCTGTCAATTACATCTCATCAACTGAAGTGGATTTCTTAAGAAGAGTAAAATCAAACTTCAGTTCTGGAACAACCAGCCTGATCTTCAGGATTCTAGAGCAGTCTAAGATTGAACCTACAACCAATCAGACTTATGGTGAACTCTTGAAAAATCTCACGTTTATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATTGCCTGTAGACTCAGGCCTTTATCTACAGCCACATAAAGAAGGGCTTTATCTTGTCACAGATGCTCATAAAGAAGGGCTGCAAGTTTTTGTATCAGACCTTATTAATGATGTTCCATTTAGCTACGATTTCAGTTATGATCCTCTGGCTGAATGTCTAGCTTTCATTGATGGTCGTGATTTCTCTGTTGATGGTGTGCTGTCTGACTTCCCAGTAACTCCATCTGCGGCCATAAATTGCTTTTCTGGCCTAAGGGAAGATGCCAAAAAACAAGTGGACACTTTGGTTATCACCAAATATGGAGCAAGTGGAGACTATCCTGCTTGTACTGACCTTGCATATAATAGAGCTAAATCACATGGGGCAGATGTACTTGACTGTCCTGTTCAAATGTCCAAGGATGGAACACCCTTTTGCTTAAGCTCTATAGATCTTTCAGAGAGCACAACAGTTGCTGGTACAAAATTCAAAGACCGTGCAACAACTATCCGGGAGATTAAATATCGCAGTGGCATATATACATTCAGTTTGACATGGGATGAGATAAAAACATTGACTCCCTCAATATTGAACCCTTATGAGAAATACATGTTGTCCCGGAATCCAAGATCCAAAAATCAAGGAAAACTTCTAACCTTGTCTGAGTTTTTATCCTTGACTGAAGGCTCTCGCATCTTGATCAGCATAGAGAATGCTGCCTATCTTGCAGAGAAGCAGAATTTAAGTGTGACCGGTGCAGTCCTTGATGCTTTAAAGAAAGCAAAACCAAGATCAGATAAAGTTATGATTCAGTCAATTCATAGCTCTGTGCTGAAGATATTCAAAGATAAATCCAAATATGAAAGGGTTTACAAGGTTGATGAGAATATTCGTGATGCTGATGACTCAGCCATCGAGGATATCAAAACATTTGCTGATTCTGTGGTAATAGGAAAGGCATCTGTTTTTCCTGAAACTTCGGCCTTTCTAGTTAACTCTACAAACACTGTGAAAAGGCTACAATCATTTAAGCTCCCAGTTTATGTAGAAACTTTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCAGATGCATCTattgagataaatttatttgtcattGGAACCAAGGTTAATGGCATTATTACTGACTTCCCCAAGACAGCTAATAGATACAGGAAGAACTTGTGTTTAAAGCATGGCAACAAAGCACCTTATATGAGCCCTATTGAACCTggcaaacttttaaaaaaaatttctaagttgTACTTTCCACCAATTCCCCCTCCACTTCCAGTCTTGaatgatagtaatgtgacagaGGCACCTTTGCCTGGTGTTTCTGGAAGAGTTCCAACTACCATTACCTTGTGA 2163 0.3893 MWHFMALYRVLSILILQYSLVALASSSPLGGWKTLQESPPLVIARGGFSGIFPDSSLLAYNLALETSGPNVTLWCDVQLTKDKVGICFPELKLDNATDISVAYPGKAKDYSVNGVSTRGWFSVDYNFDQLANVSLVQGVYSRSNKFDGNELHILTVKDVAKLIKSPSTGLWLNVQHDLFFKQQNLSVEIFLQSLSAKSVSVNYISSTEVDFLRRVKSNFSSGTTSLIFRILEQSKIEPTTNQTYGELLKNLTFIKTFASGILVPKGYILPVDSGLYLQPHKEGLYLVTDAHKEGLQVFVSDLINDVPFSYDFSYDPLAECLAFIDGRDFSVDGVLSDFPVTPSAAINCFSGLREDAKKQVDTLVITKYGASGDYPACTDLAYNRAKSHGADVLDCPVQMSKDGTPFCLSSIDLSESTTVAGTKFKDRATTIREIKYRSGIYTFSLTWDEIKTLTPSILNPYEKYMLSRNPRSKNQGKLLTLSEFLSLTEGSRILISIENAAYLAEKQNLSVTGAVLDALKKAKPRSDKVMIQSIHSSVLKIFKDKSKYERVYKVDENIRDADDSAIEDIKTFADSVVIGKASVFPETSAFLVNSTNTVKRLQSFKLPVYVETFSNEFVSQAWDYYSDASIEINLFVIGTKVNGIITDFPKTANRYRKNLCLKHGNKAPYMSPIEPGKLLKKISKLYFPPIPPPLPVLNDSNVTEAPLPGVSGRVPTTITL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1021 720 ProSiteProfiles GP-PDE domain profile. 362 656 IPR030395 GO:0006629|GO:0008081
Ssu9g1021 720 CDD GDPD_SHV3_repeat_1 40 345 - -
Ssu9g1021 720 SUPERFAMILY PLC-like phosphodiesterases 39 345 IPR017946 GO:0006629|GO:0008081
Ssu9g1021 720 Pfam Glycerophosphoryl diester phosphodiesterase family 369 651 IPR030395 GO:0006629|GO:0008081
Ssu9g1021 720 SUPERFAMILY PLC-like phosphodiesterases 363 656 IPR017946 GO:0006629|GO:0008081
Ssu9g1021 720 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 5 716 - -
Ssu9g1021 720 ProSiteProfiles GP-PDE domain profile. 40 346 IPR030395 GO:0006629|GO:0008081
Ssu9g1021 720 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 5 716 - -
Ssu9g1021 720 Gene3D Phosphatidylinositol (PI) phosphodiesterase 39 345 IPR017946 GO:0006629|GO:0008081
Ssu9g1021 720 Gene3D Phosphatidylinositol (PI) phosphodiesterase 361 655 IPR017946 GO:0006629|GO:0008081
Ssu9g1021 720 CDD GDPD_SHV3_repeat_2 363 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1021 Ssu-Chr9 40828429 40834495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1021 6 717 Receptor kinase-like Gene Family AT4G26690 55.234 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1021 - - gmx:100799882 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1021 9 40828429 40834495 Ssu9g1021 9 40828429 40834495 ECH