Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1019 ATGGCAAAGACTAATGGCAATGCTTTAGTGCAGTGGCTAGTAGCAACATTACTCATTGCCATGTTGGGTGCTGCCAAAGCTGTTGTTTTATGTGACATAGAGTCAAGTAAGCTAAACTTATGCTATGCAGCAGTTACTGGGAAACACCCTCCAAGACCCAATGAAAAATGCTGTGAAGTTGTTAAAAATGCCAATTTGCCTTGCCTTTGCAGATACAAGTCTATCCTACCTGCAGTTGGAATCAACCCCACCAATGCTTTGACCTTGCCCAGTAGATGTGGTCTGAAAACACCACCTGAATGTAGAGGTAATTATCTTAAGCCTGAATAG 330 0.4242 MAKTNGNALVQWLVATLLIAMLGAAKAVVLCDIESSKLNLCYAAVTGKHPPRPNEKCCEVVKNANLPCLCRYKSILPAVGINPTNALTLPSRCGLKTPPECRGNYLKPE 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1019 109 CDD nsLTP_like 31 99 IPR044741 -
Ssu9g1019 109 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Ssu9g1019 109 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 102 IPR036312 -
Ssu9g1019 109 Pfam Probable lipid transfer 23 100 IPR016140 -
Ssu9g1019 109 SMART aai_6 31 101 IPR016140 -
Ssu9g1019 109 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Ssu9g1019 109 Gene3D - 27 101 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1019 Ssu-Chr9 40810865 40811194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1019 1 106 Acyl Lipid Metabolism Gene Families AT5G55410 34.545 1.74e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1019 - - gmx:100812796 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1019 9 40810865 40811194 Ssu9g1019 9 40810865 40811194 ECH