Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1007 ATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAGGGTGGGGCTGGCCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGACTAATTAGCTGTGAGAAAAGAGACAGTTTTAACATTCCAGTTTATGCACCAAGCCTTCAAGACTTCAAGGAGGTGGTTGAAGCTGATGGTTCATTTTCCATAAACAAGCTTGAGGTTTTCAAAGGGGGAAGCCCTCTTGTGGTGAACCAGCCAGATGATGCTAGTGAAGTAGGGAGGGCCCTTGCCAACAGCTGCAGGAGTGTGTCTGGTGTCCTTGTTGATGCTCACATTGGTGACAAGCTTAGTGAGGAGCTGTTTCTGAGAGTGGAACGTAGAGCCACAAGCCATGGCAAAGAGTTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTGCTTTTGCTCTATGA 468 0.4786 MFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISCEKRDSFNIPVYAPSLQDFKEVVEADGSFSINKLEVFKGGSPLVVNQPDDASEVGRALANSCRSVSGVLVDAHIGDKLSEELFLRVERRATSHGKELLEQLQFFHIVASLAFAL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1007 155 Gene3D Vaccinia Virus protein VP39 1 81 IPR029063 -
Ssu9g1007 155 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 152 IPR005299 GO:0008168
Ssu9g1007 155 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 151 IPR029063 -
Ssu9g1007 155 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 1 152 - -
Ssu9g1007 155 Pfam SAM dependent carboxyl methyltransferase 1 151 IPR005299 GO:0008168
Ssu9g1007 155 Gene3D - 10 134 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1007 Ssu-Chr9 40612605 40614055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1007 K18848 - gmx:100801476 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1007 9 40612605 40614055 Ssu9g1007 9 40612605 40614055 ECH