Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0975 ATGAACAGGTTTAAGATATCTCAAGTTCTAGTGCTCATTGTTCTAGTTGTTCTTCTTGTCATCACACCCTCTTTACCTTCCTCTCTGAGACCAACGTACTTTTATTTCATCATAAACTTCCTCATCATGGCACTTTGTGCTGAAGCTGGCCTCCTTTCAGTTTTTGCTAGGCCTCTAGAAGACAGAAAGCAGTCTGCTTCTGTTGCCATTAAACCTGTGATGCAATCAGAAGCCAGTTCTGAGAAAAGAGAGGCTTCCAATTCCACCCCTACAGTTGTCAGTGCTGTCTCGGAACATGTTGAAAAGTCTGCATCTGAGAGGGTTGTTTGTGTCACCAAAGTGGACAAGGTGCAAAATTGTCCTACAGTGCCTAACCTTTTCTTCATAGGGAGTGGAGAAGCTGATCATGAAGAAGTCATGGATGAAGAGCTTGAAGCAGAAGAGGAGATTGGAGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAAGATGCAAAGTGAGGAATCTTGGATTTCTTAG 552 0.4348 MNRFKISQVLVLIVLVVLLVITPSLPSSLRPTYFYFIINFLIMALCAEAGLLSVFARPLEDRKQSASVAIKPVMQSEASSEKREASNSTPTVVSAVSEHVEKSASERVVCVTKVDKVQNCPTVPNLFFIGSGEADHEEVMDEELEAEEEIGGVNGQELFAKAEAFIGNFYKQLKMQSEESWIS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0975 183 Pfam Cotton fibre expressed protein 156 181 IPR008480 -
Ssu9g0975 183 PANTHER OS01G0532300 PROTEIN 1 181 - -
Ssu9g0975 183 PANTHER OS01G0532300 PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0975 Ssu-Chr9 39657675 39658226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0975 - - ccaj:109811312 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0975 9 39657675 39658226 Ssu9g0975 9 39657675 39658226 ECH