Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0922 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTCACTGCTGTAGTTAGGCAACGTGGGATTGATGTTTTGTTGAATTATGAATCCAAACGCGAAACCCCGGCCGTGGTCTGCTTCGGCGAGAAGCAGCGGCTTTTGGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACATCAAGTCCACAATATCTCAAATAAAGAGACTGATTGGGAGGAAATTTGCGGACCCTGATGTGGAAAAAGAGCGGAAAATGCTCCCTGTTGAAACTTCTGAGGGTCCAGATGGAGGCATTTTGATTCACTTGAAGTACATGGGGGAGATTCATGTATTTACACCTGTTCAAATAATGTCCATGCTCATTGCTCACTTGAAGACTATGACTGAAAAAGATTTGGAGGCACCCATTTCAGATTGTGTTATTGGGATCCCATCATACTTTACTGACTTGCAGAGACGGGCATATCTTGATGCAGCGAAAATTGCTGGGTTGAAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTATAAAACAGATTTTCGTGGTGCAGGTCCAGTTTATGTTGCATTTATTGACATTGGTCACTGTGATACTCAGGTCGCTATTGCATCATTTGAGTTTGGGAAAATGAAGATACTTTCGCATGCATTTGACAGGAGCTTAGGGGGGAGGGACTTTGATGAGGTTCTATTTAGTCATTTTGCGGCAAAATTCAAGGAAGAGTACAACATTAACGTGTATTCTAATGCCAAGGCGTGTATTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCACCTCTAAATATAGAGTGCCTGATGGATGAGAAAGATGTTAAGGGCTTTATCACAAGGGAAGAATTTGAGAAGCTGGCATCAGAATTATTGGAGAGAGTTTCTAAACCTTGCCGCAAAGCATTAATTGATGCAAACTTGACAGCAGAGAAGATTTCTTCCGTAGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCTATAAGTACATTGCTAACTTCTCTATTCAAGAAAGAACCCAGCAGACAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCCGTTTACCGTGTGAGAGAATACGAGGTCCAGGATGCTATTCCCTTTTCAATTGGActttcatcagacgaaggtccaATTGCTGCAGGATCAAATGGTGTACTTTTCCCAAGAGGCCAACCCTTTCCAAGTGTTAAAGTCATAACCTTACAGCGAAGTAATTTGTTTCATTTGGAAGCTTTCTATGTCTATCCAGATGAGCTACCACCTGGGACATCTCCTAAAATTAGTTGCGTCACGATTGGTCCTTTCCATGGATCCAATGGTAGTAAGACCAGAGTTAAAGTTAGAGTTCCACTTAATCTGCACGGCATTGTCAGTATTGAATCAGCTACATTGATTAAGGATGACGTGGATGATTCGGTTATGGCGGGTGATTATCATTCAAATTCTGATGCAATGGATATTGATCCCATTTCTGAGACAGTTGCCAATGGGTTTGAAGATAATACCAATAAGAATTTGGAATCTCCATGTAGTTCTGCTGATGGTACAAGAAAAGATAAGGCTAACAGAAGGCTTAATGTGCCAGTGAATGAGAATATCTGTGGTGGAATGACAAAGGCAGAGATCGCAGAAGCTCGTGAAAAAGAACTCCAGTTGGCCCAACAGGACAGAATTGTAGAGCAAaccaaagaaaagaagaataccTTGGAGTCTTATGTCTACGATATGAGGAATAAGCTCTTCAACACGTATCGGAGCTTTGCAAGTGAACAAGAGAGGGATGACATATCTAGGAGCCTTCAAGAGACTGAGGAGTGGCTTTATGAGGATGGTATTGATGAAACTGAACATGCTTATTCTTCAAAACTGGAAGATCTGAAAAAGCTGGTAGATCCAATTGCGAATCGGTATggagatgaaaaagaaagagggcAAGCTGCAGGAGATTTATTGGAGTGCATTTTAAAGAATCGTGAGTCTGCAGATTCCCTTCCCCCCCAGGATAAAGAACTGATCATCAATGAGTGCAATAAAGTGGAGCAGTGGTTGAGAGAGAAGATCCAGCAGCAAGAATCTTTTCCTAAGAATACTGACCCAATATTATGGTCAAGTGATATTAAGAGCAAGACACAGGAGTTAAACTTAATATGCCAACGGATATTGGGATCCAAGGCTTCTCCATCTCCAGAAGACAAAGACAAGCCGGATACTTTCAATGATCCATGA 2316 0.4106 MSVVGFDIGNENCVTAVVRQRGIDVLLNYESKRETPAVVCFGEKQRLLGSAGAASAMMHIKSTISQIKRLIGRKFADPDVEKERKMLPVETSEGPDGGILIHLKYMGEIHVFTPVQIMSMLIAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGMYKTDFRGAGPVYVAFIDIGHCDTQVAIASFEFGKMKILSHAFDRSLGGRDFDEVLFSHFAAKFKEEYNINVYSNAKACIRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGFITREEFEKLASELLERVSKPCRKALIDANLTAEKISSVELVGSGSRIPAISTLLTSLFKKEPSRQLNASECVARGCALQCAMLSPVYRVREYEVQDAIPFSIGLSSDEGPIAAGSNGVLFPRGQPFPSVKVITLQRSNLFHLEAFYVYPDELPPGTSPKISCVTIGPFHGSNGSKTRVKVRVPLNLHGIVSIESATLIKDDVDDSVMAGDYHSNSDAMDIDPISETVANGFEDNTNKNLESPCSSADGTRKDKANRRLNVPVNENICGGMTKAEIAEAREKELQLAQQDRIVEQTKEKKNTLESYVYDMRNKLFNTYRSFASEQERDDISRSLQETEEWLYEDGIDETEHAYSSKLEDLKKLVDPIANRYGDEKERGQAAGDLLECILKNRESADSLPPQDKELIINECNKVEQWLREKIQQQESFPKNTDPILWSSDIKSKTQELNLICQRILGSKASPSPEDKDKPDTFNDP 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0922 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Ssu9g0922 771 CDD HSPA4_like_NDB 2 381 - -
Ssu9g0922 771 Gene3D - 38 113 - -
Ssu9g0922 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 685 751 IPR029048 -
Ssu9g0922 771 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 763 - -
Ssu9g0922 771 Pfam Hsp70 protein 3 667 IPR013126 GO:0005524|GO:0140662
Ssu9g0922 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 763 - -
Ssu9g0922 771 MobiDBLite consensus disorder prediction 756 771 - -
Ssu9g0922 771 Gene3D - 186 360 - -
Ssu9g0922 771 MobiDBLite consensus disorder prediction 750 771 - -
Ssu9g0922 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 667 IPR029048 -
Ssu9g0922 771 MobiDBLite consensus disorder prediction 529 548 - -
Ssu9g0922 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 518 IPR029047 -
Ssu9g0922 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Ssu9g0922 771 Gene3D - 567 677 IPR029048 -
Ssu9g0922 771 Coils Coil 575 595 - -
Ssu9g0922 771 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Ssu9g0922 771 Gene3D - 5 374 - -
Ssu9g0922 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Ssu9g0922 771 PRINTS 70kDa heat shock protein signature 388 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0922 Ssu-Chr9 38924094 38929400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0922 2 663 Miscellaneous Gene Families AT5G28540 29.148 1.04e-80 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0922 K09489 - gmx:100808218 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0922 9 38924094 38929400 Ssu9g0922 9 38924094 38929400 ECH