Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0920 ATGGCCTATGAGAGGATTAGGCAAGGAAACATTTATGGGCATGTGACTGGTAGAATGCTGATGTGGATTCTTGGGAACCCTATAAAAATTGAAGGTGCTGAGTACTCCAATAAGAGGGCCATTTACATCAGTAATCATGCATCTCCAATTGACATATTTTTGATAATGTGGTTGACTCCTACGGGTACCGTTGGCATTGCAAAGAAGGAGATAATATGGTACCCTCTATTTGGCCAACTTTATATTTTGGCCAATCATCTTCGTATAGACCGGTCCAATCCAACCGCAGCTATTCAGTCCATGAAAGAGGCAGCTCATGCTGTTATGAAAAACAATCTGTCACTCATAATTTTTCCAGAGGGCAGAAGGTCTAAAAGTGGACGACTACTGCCTTTCAAAAAGGGTTTTGTTCATTTGGCACTGCAATCGCGTCTTCCAATTGTTCCAATGGTCCTGACAGGTACTCATCTAGCATGGAGAAAAGGAAGCTTACATGTTCGACCAGCACCACTTACTGTCAAGTATCTTCCTCCTATAAGTACTGAAAATTGGACAGTTAGCAAGATTGATGACTATGTTAAAATGTTTCATAACTTGTACGCAGAAAACCTTCCCATGTCTCAGAGACCTTTGCCTTGA 639 0.4147 MAYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYILANHLRIDRSNPTAAIQSMKEAAHAVMKNNLSLIIFPEGRRSKSGRLLPFKKGFVHLALQSRLPIVPMVLTGTHLAWRKGSLHVRPAPLTVKYLPPISTENWTVSKIDDYVKMFHNLYAENLPMSQRPLP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0920 212 Pfam Acyltransferase 28 152 IPR002123 GO:0016746
Ssu9g0920 212 CDD LPLAT_AGPAT-like 18 190 - -
Ssu9g0920 212 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 208 - -
Ssu9g0920 212 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 3 208 - -
Ssu9g0920 212 SMART plsc_2 40 155 IPR002123 GO:0016746
Ssu9g0920 212 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 23 204 - -
Ssu9g0920 212 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 36 152 IPR004552 GO:0003841|GO:0008654|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0920 Ssu-Chr9 38882905 38885097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0920 28 155 Acyl Lipid Metabolism Gene Families AT4G30580 34.351 5.31e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0920 K13509 - pvu:PHAVU_006G042300g 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0920 9 38882905 38885097 Ssu9g0920 9 38882905 38885097 ECH