Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0912 ATGGAACTGAAACTACTTGTAACGGTTTTATTGATGGTGTCTGCAACTGCCTCAGCTGATTACATTCGACCCCTGCCTCGAAAAGCTTTACATCTCCCATGGGATTCTAAACCCTCCTCTTACCCTCAGCAGGtacacatttccttagcaggaGACCAGCACATGAGAGTTACCTGGATTACTGATGATAAATCTGCACCTTCAGTTGTAGAATATGGAACATTGCCAGGGCAATATGACTCTGTAGCTGAAGGAGAGACCAGCTCTTATAGTTATCTGCTCTATAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACAATTACCGATGCGGTGGACAAGGCCCCGAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCTGTGGCTGGGGATTTGGGTCAAACTGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCACCTGCTTCCAGGAGACCTTTCATATGCTGATTATATCCAGCACCGCTGGGACACGTTTGGTAGGCTAGTGCAGCCACTTGCTAGTGCACGACCATGGATGGTAACGCAAGGAAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAAGTTCAAATCTCTATTATTCATTTGAAGTTGCAGGTGTTCACATTATCATGCTCGGGTCCTATGCAGATTATGATGAATACTCTGAACAATATAGATGGCTAAAGGCAGATCTGTCAAAGGTGGATAGGAAAAGGACACCTTGGTTGCTTGTGTTATTTCATGTGCCATGGTATAATAGTAACACAGCGCATCAAGGTGAAGGGGCTGATATGATGGCAGCTATGGAGCCATTGCTTTATACTGCTAGCGTCGATTTAGTTCTTGCTGGTCACGTGCATGCTTATGAACGCTCAAAACGTGTATACAATGGAAGACTTGATCCTTGTGGTTCAGTCCACATAACCATTGGTGATGGAGGAAACAGGGAAGGCTTAGCTCCTAGGTATATAAATCCACAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTAAAGATCATAAACTCTACGCATGCTTTCTGGAGTTGGCACAGGAATGACGATGATGAACCGGTAAAATCTGATGATGTCTGGATAACCTCTTTGACCAGCTCAGGATGCATTGATCAGAAGAGAAATGAACTCAGGAGTAAACTTATGACACCTTAA 1299 0.4296 MELKLLVTVLLMVSATASADYIRPLPRKALHLPWDSKPSSYPQQVHISLAGDQHMRVTWITDDKSAPSVVEYGTLPGQYDSVAEGETSSYSYLLYSSGKIHHTVIGPLEHNSVYNYRCGGQGPEFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYIQHRWDTFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFVSYNSRWKMPFEESGSSSNLYYSFEVAGVHIIMLGSYADYDEYSEQYRWLKADLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGADMMAAMEPLLYTASVDLVLAGHVHAYERSKRVYNGRLDPCGSVHITIGDGGNREGLAPRYINPQPIWSEFREASFGHGELKIINSTHAFWSWHRNDDDEPVKSDDVWITSLTSSGCIDQKRNELRSKLMTP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0912 432 Gene3D - 41 132 - -
Ssu9g0912 432 SUPERFAMILY Metallo-dependent phosphatases 135 402 IPR029052 -
Ssu9g0912 432 Gene3D - 133 419 IPR029052 -
Ssu9g0912 432 PANTHER PURPLE ACID PHOSPHATASE 4 422 - -
Ssu9g0912 432 Pfam Calcineurin-like phosphoesterase 137 327 IPR004843 GO:0016787
Ssu9g0912 432 CDD MPP_PAPs 135 411 IPR041792 -
Ssu9g0912 432 PANTHER ACID PHOSPHATASE RELATED 4 422 IPR039331 GO:0003993
Ssu9g0912 432 Pfam Iron/zinc purple acid phosphatase-like protein C 344 399 IPR025733 -
Ssu9g0912 432 Pfam Purple acid Phosphatase, N-terminal domain 42 122 IPR015914 GO:0003993|GO:0046872
Ssu9g0912 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 32 131 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0912 Ssu-Chr9 38701991 38706124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0912 42 400 Miscellaneous Gene Families AT2G03450 26.790 7.30e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0912 K22390 - gmx:100782338 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0912 9 38701991 38706124 Ssu9g0912 9 38701991 38706124 ECH