Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0892 ATGGTGGAGCTGAAGCAGCGGATCCTAACCTCGCTCTCCAAACTCTCCGACCGCGACACGCACCAGATCGCCGTGGAGGACCTCGAGAAGACCATCGCCGCGCTCTCGCCGGACGCCATTCCCATGATCCTCAACTGCCTCTACGACGCCACCGCCGACCCCAAGCCCGCCGTCAAGCGGGATGCCCTCCGCCTCCTCGCCGTCGTCTGCGCCGCCCACGCCGACGCCGCCGCCGCGCACCTCACCAAGATCATCGCCCACGTCGTCCGCCGCCTCAAGGACGCCGACTCCGCCGTCCGCGACGCCTGCCGCGACACCGTCGGCGCCCTCGCAGCGCAGTACCTGAAAGGAGGGgacggcggcggcggcggaggaggagggGTGGGGACGGTGGTGGGGCTGTTCGTGAAGCCGCTGTTCGAGGCCATGGGGGAGCAGAACAAGGGCGTGCAGGCCGGGGCGGCGGTGTGCATGGCGAAAATGGTGGAGTGTGCTGGCGGCGGCGGTGGCGGTGACGTGCCGGTGCCGGCGTTCCAGAAGCTGTGTCCGAGGATCTGCAAGCTGCTCAACAGTCCCAATTTCATGGCGAAGGCGGCGATTTTGCCGGTGGTTGTTAGCTTGTCACAGGTTGGTGCAATTGCACCACAAAGCTTGGAACATTTGCTGCCTAGCATTCATGAATGCCTTACCAGTACTGATTGGGCAACACGTAAAGCAGCAGCTGAGGCATTAAGTTCCTTGGCTTTGCATTCAAGCAGTTTGGTTACTGATAGAGCAGCACCCACATTGACAGTACTTGAGGCTTGCAGATTTGACAAGATAAAACCTGTGAGAGAGAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATTTCAGGGAAAGGAGATGGATCTCCTGATGATTCAAAGCCCTTGTCTGatgGTGGGAATGAATCAGCTATTTCGACAGAAACAAGTGACCCGAGAAAAGTAAATCTTGACGAGAGGAAGACAGATCCATCAGTAAAGGATTCATCAAATAGTTCTTCAAATATGGATTCAACTGCTAAGGCCAAAGCAACTGGCATCTCAGAGAAGGCAGTTGTAATACTGAAGAAGAAAGCACCTGCGTTAACTGATAAAGAGCTAAATccagaattttttcaaaaacttgaaAGAAGGGGTTCAGATGATTTACCAGTAGAAGTAGTTGTGCCTCGTAGAGGCCTCAATTCTTCAAACTCAAACAATGAGGAAGAATCAGAGGCAAATGCTAAAGATTCAAAAGAACGAACAAATTCTGTTGCAAACATCCCTAATGATGATTTTCATGGATCTGCCAGTAATAAATATCGTATGTTTGAGAGAGGCAATGACGGAAATTCCAAACAAAGGAATTATGATGATTTTGGCCATGACAGATACTCTGAAAGGAGAGTGAATTCAAAAGAACTGAAGACAAAAGCATATGATACTGATGATAGGACTGAAAATGATCAGAGGGAGGGTTCTGCCAATCTTGCAGGTTTTTCTAAAACTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGGAAACTGGTTGGCCATCCAGCGGCAGTTACTGCAGCTGGAAAGGCAACAAGTTCATCTGATGAACATGCTGCAGGACTTCATGGGTGGATCTCGCGATAGCATGGTGACTCTAGAGAACAGAGTGCGAGGTCTTGAGAGAATTGTTGAAGACATGTCAAGAGATTTATCCATATCATCAGGTCGTAGAAACTTTACAGGATTTGAGGGATCATCTAGTAGGCCTTCTAGCAAGTATAATGGTTTCAACGACTACTCCAGTTCCAAGTATGGAAGAGGTGGTGATGGACGCATCCCATTTGGTGAAAGATTTGCCCAATCTGATGGAAATGCTTTGGGAATGAGGGGTAGAGGGCCATCTTGGAGATCTGACATGTCTGAGGGGTGGGATCTTCCTGGATATGGTGCTTCTAGAAATGGACAGATTTCCTCAAGGAGGGCTTTTGGTGGTAGTTCTGCTGATGGAAGATCGCCAAAATCTGTGCATGAGAGTGATCAAGCAGGCAACAGGAGAGCTTGGGATAAAGCTGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAACATCTCGAGCAACAAGGGTAGCAATCCCTGAAATGACTGCAGAAGCTGTGGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGAGAAATGCAATGGATGCCCTTCAAGTAGGTGACATAGATTCAGCCTTCGCAGAAGTATTGTCTACTGGCGATGATATTTTGCTTGTAAAGCTAATGGATAGGACGGGCCCTGTGATTGACCAATTTTCAAGTGAAGTTGCATGTGAAATTGTGAATGCCATTGGACAATTCTTACTGGACCAGAACCTGTATGACATTTGTTTGTCTTGGACTCAACAGTTGCTGGAGATATTATTGGAAAATGGCCCTGATACTTTTGGCATTCCCATGGAAGTGAAGAAAGAGCTCTTGCTGAATTTACATGAAGCTTCTACTGATACAGCTGAGGCCTGGGAAGGGGCACAGCCAGAACAGCTTCTATTGCAGCTGGCATCAGCCTGGGAAATTGATCTACAGCAGCATGACAAATAG 2700 0.4837 MVELKQRILTSLSKLSDRDTHQIAVEDLEKTIAALSPDAIPMILNCLYDATADPKPAVKRDALRLLAVVCAAHADAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGGDGGGGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGGGGGDVPVPAFQKLCPRICKLLNSPNFMAKAAILPVVVSLSQVGAIAPQSLEHLLPSIHECLTSTDWATRKAAAEALSSLALHSSSLVTDRAAPTLTVLEACRFDKIKPVRESINEALQLWKKISGKGDGSPDDSKPLSDGGNESAISTETSDPRKVNLDERKTDPSVKDSSNSSSNMDSTAKAKATGISEKAVVILKKKAPALTDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEANAKDSKERTNSVANIPNDDFHGSASNKYRMFERGNDGNSKQRNYDDFGHDRYSERRVNSKELKTKAYDTDDRTENDQREGSANLAGFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSRDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFTGFEGSSSRPSSKYNGFNDYSSSKYGRGGDGRIPFGERFAQSDGNALGMRGRGPSWRSDMSEGWDLPGYGASRNGQISSRRAFGGSSADGRSPKSVHESDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRATRVAIPEMTAEAVADDNVGQERDAIWTSWRNAMDALQVGDIDSAFAEVLSTGDDILLVKLMDRTGPVIDQFSSEVACEIVNAIGQFLLDQNLYDICLSWTQQLLEILLENGPDTFGIPMEVKKELLLNLHEASTDTAEAWEGAQPEQLLLQLASAWEIDLQQHDK 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0892 899 MobiDBLite consensus disorder prediction 449 494 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 423 437 - -
Ssu9g0892 899 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 899 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 495 512 - -
Ssu9g0892 899 Coils Coil 553 573 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 336 351 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 625 644 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 650 696 - -
Ssu9g0892 899 SMART TOG_3 33 280 IPR034085 -
Ssu9g0892 899 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 899 IPR033337 GO:0005874|GO:0008017
Ssu9g0892 899 SUPERFAMILY ARM repeat 12 821 IPR016024 -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 292 353 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 392 512 - -
Ssu9g0892 899 MobiDBLite consensus disorder prediction 321 335 - -
Ssu9g0892 899 Gene3D - 3 117 IPR011989 -
Ssu9g0892 899 Gene3D - 123 286 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0892 Ssu-Chr9 38271726 38277285 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0892 - - gmx:100804845 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0892 9 38271726 38277285 Ssu9g0892 9 38271726 38277285 ECH