Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0888 ATGGCTTCCATCCCATGCATCACCCACCAACCCATCACTTCCAAGCTCAATGCCTTCCCTTCACGGCACGTCTCTGCCTCAAATGCGGCCTCGCGGTTTCGGGGCACCAGAAAAAGAGTCGGGTGGCTCAGCCTCGCCTCTACAATTGGGCCCTCCAACGGCTCCAAAGCCACATGCTGGTTCAAGTTCGGCAAGAGCGGTGTCGATGCCGAAGGTGCTGGCATTTATGGCAGCCAGGGCCGTGATGACTTTGATAGAGACGATGTGGAACAGTACTTCAACTATATGGGGATGCTCGCCGTAGAAGGATCATATGATAAAATGGAGGCACTTCTAAACCAAAACATCCACCCTGTGGACATCCTTCTGCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAAAATATGATGTAAAAGATACAGATGGACGGACCGCGCTGGATAGGGCTAATGATGAAATTAAAgatttcattcttaatttttctgtGCAGAGGGCATGA 528 0.4886 MASIPCITHQPITSKLNAFPSRHVSASNAASRFRGTRKRVGWLSLASTIGPSNGSKATCWFKFGKSGVDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLNQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDTDGRTALDRANDEIKDFILNFSVQRA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0888 175 SUPERFAMILY Ankyrin repeat 98 167 IPR036770 -
Ssu9g0888 175 Gene3D - 81 172 IPR036770 -
Ssu9g0888 175 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 175 IPR044242 GO:0006886|GO:0009570|GO:0090391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0888 - - gmx:100499940 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0888 9 38209305 38213468 Ssu9g0888 9 38209305 38213468 ECH