Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0207 ATGGGTGTGATTGATTGGCACTCTGCTGCTTTGTGCTGGGTTAAGTCCAACAACACCAATTTGAAGCAACAAGTGGGGTTGGCACCACCCAGACCCATTTGTTCATTTGAGGGGAATCAGAGGAAGTTTGTGGCCATGGCTTCTACCATTCCTGTGGAGCAAGTCAACAATGGTCCTTTGCACGTGACAGGTGACTCCTTCATCAGAGAGCATCTGAGGAAGTTGGCTCCTTATCAGCCCATTTTGCCCTTTGAGGTTTTATCAGCTCATCTTGGACGTAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAAAATCCTTATGGTCCCCCTCCAGAGGTCATGGAAGCCCTAGGATCAATACAATTCCCATATGTCTATCCTGATCCAGAGAGCCGCACATTGCGTGCAGCTCTTGCCCAAGATTCAGGCCTTGAAGCTGAATATATTCTTGCAGGATGTGGTGCAGATGAGCTCATTGATTTGATAATGCGTTGTGTGCTTGATCCTGGAGACAAGATTGTGGACTGCCCTCCGACCTTCACAATGTATGAATTTGACGCTGCAGTTAATGGAGCACTTGTTATCAAAGTTCCAAGGAGGCCAGACTTCAGCTTGAATGTGGAACATATCGCAGAAGTTGTTAAACAAGAGAAGCCCAAATGCATATTTTTAACATCTCCAAATAATCCAGATGGAAGTATAATTGATGATGAAGTTCTCTTAAAGATACTTGAGCTTCCCATGTTGGTGATACTGGATGAAGCATACATTGAGTTTTCATCAATTGAATCAAGGATGAGTTGGGTGAAGAAACATGAGAATTTGATTGTTCTTCGGACATTTAGCAAAAGAGCTGGTTTAGCTGGACTTCGAGTGGGATATGGAGCTTTTCCATTGAGTATAATTGAGTATCTTTGGAGAGCAAAGCAGCCATATAATGTATCTGTTGCTGCTGAAATTTCTGCTTGTGCAGCATTACAGAATCCTACCTATCTAGAGAGTGTAAAAAATGCTTTGCTGAAAGAAAGAGGTAGGCTTTATGATCTTTTGAAGGAAGTTCCATTCCTTCGGCCATTTCCAAGCCACTCTAATTTCATTCTTTGTGAGGTTACATCTGGAAAGGATGCAAAGAAGCTAAAGGAGGACCTCGCACAAATGGGTGTGATGATTCGTCACTACGACAAGAAAGAGTTGAAAGGGTACGTTCGTGTAACTGTTGGGAAGCCTGAACAAACAGATGCACTAATGAAGTGCCTCAAGAGACTGTCATAG 1275 0.4306 MGVIDWHSAALCWVKSNNTNLKQQVGLAPPRPICSFEGNQRKFVAMASTIPVEQVNNGPLHVTGDSFIREHLRKLAPYQPILPFEVLSAHLGRKPEDIVKLDANENPYGPPPEVMEALGSIQFPYVYPDPESRTLRAALAQDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGALVIKVPRRPDFSLNVEHIAEVVKQEKPKCIFLTSPNNPDGSIIDDEVLLKILELPMLVILDEAYIEFSSIESRMSWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEISACAALQNPTYLESVKNALLKERGRLYDLLKEVPFLRPFPSHSNFILCEVTSGKDAKKLKEDLAQMGVMIRHYDKKELKGYVRVTVGKPEQTDALMKCLKRLS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0207 424 Hamap Histidinol-phosphate aminotransferase [hisC]. 67 424 IPR005861 GO:0000105|GO:0004400
Ssu9g0207 424 Gene3D Aspartate Aminotransferase, domain 1 96 417 IPR015422 GO:0003824
Ssu9g0207 424 CDD AAT_like 99 422 - -
Ssu9g0207 424 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE 46 423 - -
Ssu9g0207 424 TIGRFAM hisC: histidinol-phosphate transaminase 69 422 IPR005861 GO:0000105|GO:0004400
Ssu9g0207 424 Gene3D - 127 328 IPR015421 GO:0003824
Ssu9g0207 424 SUPERFAMILY PLP-dependent transferases 77 422 IPR015424 -
Ssu9g0207 424 Pfam Aminotransferase class I and II 97 417 IPR004839 GO:0009058|GO:0030170
Ssu9g0207 424 PANTHER HISTIDINOL-PHOSPHATE AMINOTRANSFERASE-RELATED 46 423 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0207 K00817 - gmx:100784293 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0207 9 12377382 12394782 Ssu9g0207 9 12377382 12394782 ECH