Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0083 ATGGGATTGAATCTTTGTCCAAACTCAAAGGAATCTTTAGAAGGTTTTGGTTGCAAACGAAAGAAAGATCTTAGTCAGATGGGCGATGATGAGTTGGTGACAGTTGACAACATATCCCAAGATGAACAGCTTGAATCAGCTTCTTGTGAGAAGGAAGAGGATTGGAGGGAAAATTTGGAGCAGAAATCATCAGAAGTTAGTTCTTCTCCTCGAATAGAGCCTGTTGGAACCGAGAGGAACCTGCTTGTTGCTGACCGTGAGATTATGTTTTCTAGATCAATGATGGAGAATTGGGGTTCTTCAAGACAAGACCTAATATTGGACAGGCTATCAGAGTGTGAGAAGCAAAAGCTGATTAACCTAGTGAAGATACAAAGTGACGGGACTGTTGAAGTTGATCTAGAAAAGGATGCTCCTCTTGCATCAGAATTGTTGGAGTTCCAATCTTTTGAAGAGTCAACAGTGAGTGGAACTCTTATTTCTGAATTGAAAAAGTCAGCTCCCTGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGATGTACAACCTTTCCTGGCCATTGCAAAAAAACTTCAGGAGTATGGTCATCGTGTTAGGCTGGCAACTCATGCTGATTTTGACACATTTGTAAAGTCCGCTGGTGTTGATTTCTATCCATTGGGTGGTGATCCTCGTGCTTTGGCACAATATATGGTGAGAAATAAAGGTATAATCCCATCTGGTCCAACTGAAATATCTATCCAAAGAAAACAGCTGAAGGCTATTATTGATTCTCTTCTTCCAGCATGCATAGCACCTGATTTGGAAACCGGTGTTCCTTTTAGAGCTCAGGCTATTATTGCGAATCCTACTGCATGTGGACATGCACACGTTGCTGAAGCCCTCAGGGTGCCCCTTCACATCTTCTTCACAATGCCTTGGACGCCAACATATGAGTTCCCACACCCTTTGGCACGTGTTCCTCAAAGTGCTGGTTATTGGCTGTCATATATAATTGTGGATCTACTGATATGGTGGGGGATACGAGGAATTATCAATGACTTcaggaaaagaaaattgaagctTGCTCCTGTTGCATACTTCAGTTTGTACCATGGATCAACATCTCATTTACCAACTGGCTATATGTGGAGTCCTCATGTTGTTCCAAAACCAAGTGTGGCAGAAGTTCCTCCCAATGTTTTCCTGCTAGAGGAATGCCCTCATGACTGGTTGTTTCCTCAATGTTCTGCTTTGGTGCATCATGGTGGTGCTGGAACAACGGCTACAGGACTAAAGGCTGGGTGTCCAACAACCATTGTTCCATTCTTTGGAGATCAGTTCTTTTGGGGAGATAGAATATATCAGAAAGGGCTGGGACCAGCTCCAATTCCAATATCTCAGCTCAGTCTTGAGAATTTATCAAATGCCATAAAATTCATGCTCCAGCCAGAGGTAAAATCCCGAGCAATGGAAATCGCTAAGTCGATTGAGAATGAAGATGGAGTTACTGCTGCAGTTGATGCATTTCATCGCAATCTACCTCCTGAGCTACCACTAACAACTCCATCTCCAGCGGTGGAGGACCATGCAAATCCTTTGCAGTGGTTTTTTCTCCAACTTGCAAAGTTGTGCAGTTTACCTTGTGGGGGtgtatag 1644 0.4264 MGLNLCPNSKESLEGFGCKRKKDLSQMGDDELVTVDNISQDEQLESASCEKEEDWRENLEQKSSEVSSSPRIEPVGTERNLLVADREIMFSRSMMENWGSSRQDLILDRLSECEKQKLINLVKIQSDGTVEVDLEKDAPLASELLEFQSFEESTVSGTLISELKKSAPWLQIVILVVGTRGDVQPFLAIAKKLQEYGHRVRLATHADFDTFVKSAGVDFYPLGGDPRALAQYMVRNKGIIPSGPTEISIQRKQLKAIIDSLLPACIAPDLETGVPFRAQAIIANPTACGHAHVAEALRVPLHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGIRGIINDFRKRKLKLAPVAYFSLYHGSTSHLPTGYMWSPHVVPKPSVAEVPPNVFLLEECPHDWLFPQCSALVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQKGLGPAPIPISQLSLENLSNAIKFMLQPEVKSRAMEIAKSIENEDGVTAAVDAFHRNLPPELPLTTPSPAVEDHANPLQWFFLQLAKLCSLPCGGV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0083 547 Pfam Glycosyltransferase family 28 N-terminal domain 172 315 IPR004276 GO:0005975|GO:0016758|GO:0030259
Ssu9g0083 547 Gene3D Glycogen Phosphorylase B; 172 388 - -
Ssu9g0083 547 MobiDBLite consensus disorder prediction 45 61 - -
Ssu9g0083 547 CDD GT1_Gtf-like 172 507 IPR002213 GO:0008194
Ssu9g0083 547 Gene3D Glycogen Phosphorylase B; 391 492 - -
Ssu9g0083 547 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 172 508 - -
Ssu9g0083 547 MobiDBLite consensus disorder prediction 29 72 - -
Ssu9g0083 547 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 408 489 IPR002213 GO:0008194
Ssu9g0083 547 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 36 388 - -
Ssu9g0083 547 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 389 545 - -
Ssu9g0083 547 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 36 388 - -
Ssu9g0083 547 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 389 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0083 Ssu-Chr9 7650650 7661652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0083 391 547 Glycosyltransferase AT1G43620 77.500 1.39e-83 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0083 K05841 - gmx:100797391 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0083 9 7650650 7661652 Ssu9g0083 9 7650650 7661652 ECH