Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0023 ATGGCTCAGTTCGCGGCCTCACGATCCATTCAAAGCACCCCTCTGTGCCCCACTTCCGGATCTGCACGCGACAGGGCCCAGAACCTGTTAAAGCCTCCATCTTTTGCATCCAGAGTGTTCCCTTCCGAAGGGAACAAACACAAGCGCTCCCAACTTTTCCTCGGAAGCTTCCAGATCAGTGCAAGGAAGTCTGCCCCTTCTGAAGTCATCCCGGTGTCACCCGAAGATGATCCAAAGATTGAGGAGCATTTGCAGCACTTGCGTGGGGTGCAGCCGTTTGGGGAGAACTCGGTTGGGATGTGGTCGAAGCCCACTTTTAGGCGCAAGACGAAGATAGTGTGTACCGTTGGACCTTCTACCAATACGAGGGAAATGATTTGGAAGCTGGCTGAGGCCGGCATGAACGTTGCTCGGTTGAATATGTCTCATGGGGACCATGCTTCTCATCAGAAGGTTATTGACTTGGTTAAGGAATATAATGCTCAGTCCAAGGACAATGTGATCGCAATCATGCTTGACACAAaggGTCCTGAGGTTAGAAGTGGGGATTTGCCTCAACCAATCACATTAATGCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAGTGGGGGACATGCTTCTTGTTGATGGCGGTATGATGTCTATGGTTGTTAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGAGACATTTGAATGTTAGAGGAAAAAGTGCAACACTGCCCTCAATCACTGAGAAGGATTGGGATGATATCAAGTTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCTGAAGTTGTCCATGAATTGAAGAATTATTTGAAGaGCTGTGGTGCTGATATACATGTCATCGTAAAAATTGAAAGTGCAGATTCTATACCAAACTTGCATTCAATTATCACTGCATCTGATGGGGCTATGGTTGCCAGAGGAGATCTTGGTGCTGAGCTCCCTATTGAAGAGGTTCCACTTTTACAGGAAGAGATAATCAACTTGTGTCGTAGCATGGGAAAAGCTGTTATTGTGGCAACAAATATGCTAGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTATCAGATATAGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGTTGTCTGGAGAAACAGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACGGTAGCATTGCGGACAGAAGCCACTATACCAGGTGGTCAAATGCCACCTAATATTGGTCAAGTGTTCAAGAACCACATGAGTGAGATGTTTGCATACCACGCAACCATGATGTCTAACACCCTTGGAACCTCAACTGTTGTCTTCACAAGAACGGGTTTCATGGCTATCCTACTGAGCCACTATCGTCCTTCTGGCACCATATTTGCTTTTACAGATGAGAAGAGGGTGCAGCAGAGGCTGGCATTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGACGATGCTGAAGCAACTTTCAGAAGAGCCTTGGATTTACTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCTACTCACAATATCCAGGTTAGGAAAGTGTAA 1734 0.4539 MAQFAASRSIQSTPLCPTSGSARDRAQNLLKPPSFASRVFPSEGNKHKRSQLFLGSFQISARKSAPSEVIPVSPEDDPKIEEHLQHLRGVQPFGENSVGMWSKPTFRRKTKIVCTVGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLMPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSMVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDAEATFRRALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0023 577 Pfam Pyruvate kinase, alpha/beta domain 465 557 IPR015795 -
Ssu9g0023 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 442 IPR015813 GO:0003824
Ssu9g0023 577 MobiDBLite consensus disorder prediction 1 25 - -
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 290 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 SUPERFAMILY PK C-terminal domain-like 426 577 IPR036918 -
Ssu9g0023 577 Gene3D - 450 577 IPR036918 -
Ssu9g0023 577 Gene3D - 110 435 IPR040442 -
Ssu9g0023 577 PANTHER PYRUVATE KINASE 33 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 SUPERFAMILY PK beta-barrel domain-like 177 268 IPR011037 -
Ssu9g0023 577 Gene3D - 178 271 IPR015806 GO:0004743|GO:0006096
Ssu9g0023 577 PANTHER PYRUVATE KINASE 33 577 - -
Ssu9g0023 577 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Ssu9g0023 577 MobiDBLite consensus disorder prediction 1 27 - -
Ssu9g0023 577 TIGRFAM pyruv_kin: pyruvate kinase 108 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu9g0023 577 Pfam Pyruvate kinase, barrel domain 108 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0023 Ssu-Chr9 2912566 2921528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0023 K00873 - gmx:100803036 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0023 9 2912566 2921528 Ssu9g0023 9 2912566 2921528 ECH