Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0004 AtggaaaacaacataaacattGAAATTGCAGAACAAGGCTCTCCTGAAGTCCCATCACTTATTAAGTATATATCATCAAGTGAAGTTGCTGGCTTTGATAATTCTGACTCTCAATTTCCCAGCCCATCTGCCATAGGAAGTGGAGCAACCTTACTAGGAAGACAACATGATGAACCTGTAGTCATCAATCATCAAAGGAAGTATTCTGTCAGCATGCCACTTTCTTCTGAAGAAGTTCAGCTTCAGCCACTGGACACCAAAACAGATGGCATTACCATTTCCTCTTCTCAATCAGGAACTGCTAGCTCTATCGATCCACAACCATCAAAATGTTACTCTCAACCAATGCCAAAAGGCCATGTGCGCCAAGAGGCAGATAATGGAGTCAAAATAAACAACCATCCTGGCATCAAAGCATTCAAGGACAAGAGTCACCCGAGAGAAACTACACAAGATGGTAACAACAACTGTAGGAGCACTGATAGGGCTTTACCCGTTGATCGGTATTTCGATGCATTGGAAGGTCCAGAGTTAGAAACTCTCAGGGCTTCAGAAGAGACAGTGCTTCCTCAGGACAGGCAATGGCCATTTCTTCTTCGGTTTCCTGTTCCATCTTTTGGTATTTGCCTTGGAGTTAGCAGCCAAGCAATTCTCTGGAAAGCACTTGCCACATCACCTTCCACACAGTTTCTTCACATAAGCCTCAAAGTCAACTTAATCTTATGGTTCATATCCATTGCTCTTATTGCCACAGTTTTCACCATCTATCTTCTCAAAATCATTCTCTACTTTGAAGCAGTTCGTCGTGAGTACTACCATCCAATCCGTGTTAACTTCTTCTTTGCACCATGGATAGCTCTCTTGTTCTTGGCTCTCGGGGTTCCCCCATCAGTGACCAAAGACTTGCACCATGCCCTTTGGTACATTCTAATGATACCAATCTTCTGTCTTGAACTTAAGATCTATGGACAGTGGATGTCTGGGGGACAGAGGAGGCTCTCAAAGGTGGCCAATCCTTCAAACCATTTATCAATTGTTGGAAACTTTGTGGGGGCCTTACTTGGGGCTTCTATGGGCCTAAAAGAAGGGCCCATTTTCTTCTTTGCTGTTGGCTTGGCCCACTACACAGTCATGTTTGTAACTCTTTACCAGAGACTTCCAACAAATGAGACCCTCCCAAAAGAGCTCCATCCTGTGTTCTTTCTGTTTGTTGCAGCACCTAGTGTTGCTTCCATGGCTTGGGCCAAGATTCAGGGTTCTTTTGATTATGGATCACGGATTGCCTATTTCATTGCCCTGTTCCTTTATTTCTCATTGGCTGTCCGGATCAATTTTTTCAGAGGATTCACATTCTCGCTTGCATGGTGGGCCTATACTTTTCCAATGACTGGTGCAGCAATTGCAACCATAAGATACTCAAATCAGGTCACAAATACAGTTACCAAGACATTGTGTGTTATACTGAGTCTCATCTCCACACTCATAGTAACAGCACTGCTTGTATCAACTATATTACATGCCTTTGTCTTCAAAAACCTCTTTCCCAACGACCTTGCCATTGCCATAAGTGATAGAAAGAGAAGGCCACAAAAGAAGTGGCTAGGTCTTAGATACAGAAGCCATGACTCCAAGGAGATTGAAAATTACCTGAAGTTTGTGAACTcggataaaattgatttagaagCTTCTACCCCACTACCAAATGGCACAGAGGATTCACCATCTACCTGA 1731 0.4258 MENNINIEIAEQGSPEVPSLIKYISSSEVAGFDNSDSQFPSPSAIGSGATLLGRQHDEPVVINHQRKYSVSMPLSSEEVQLQPLDTKTDGITISSSQSGTASSIDPQPSKCYSQPMPKGHVRQEADNGVKINNHPGIKAFKDKSHPRETTQDGNNNCRSTDRALPVDRYFDALEGPELETLRASEETVLPQDRQWPFLLRFPVPSFGICLGVSSQAILWKALATSPSTQFLHISLKVNLILWFISIALIATVFTIYLLKIILYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKDLHHALWYILMIPIFCLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGASMGLKEGPIFFFAVGLAHYTVMFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWAKIQGSFDYGSRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATIRYSNQVTNTVTKTLCVILSLISTLIVTALLVSTILHAFVFKNLFPNDLAIAISDRKRRPQKKWLGLRYRSHDSKEIENYLKFVNSDKIDLEASTPLPNGTEDSPST 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0004 576 Pfam Voltage-dependent anion channel 201 504 IPR004695 GO:0016021|GO:0055085
Ssu9g0004 576 Gene3D - 197 514 IPR038665 -
Ssu9g0004 576 MobiDBLite consensus disorder prediction 137 158 - -
Ssu9g0004 576 CDD TDT_SLAC1_like 200 503 - -
Ssu9g0004 576 PANTHER - 12 557 IPR030183 GO:0006873|GO:0008308|GO:0016021
Ssu9g0004 576 PANTHER S-TYPE ANION CHANNEL SLAH3 12 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0004 Ssu-Chr9 2040009 2043487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0004 - - gmx:100816885 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0004 9 2040009 2043487 Ssu9g0004 9 2040009 2043487 ECH