Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1318 ATGGTTAATGGGCAGAAAACTTGGTGTGTGGCAAAGCCTTCATCAGACCAGGCTACACTTTTGGCCAACCTCAATTATGCCTGCTCTCAAGTTGATTGCAGGATTCTGCAGAGAGGCTGCCCCTGCTCTTCCCCTGACAATCTCATGAACCATGCCTCCATAGCCATGAATATCTATTACCAATCTAGGGGAAGAAACCACTGGAATTGTGATTTCAGGGCCTCTGGCCTCGTTGTTGTCACTGATCCAAGTTATGGTAACTGCATTTACGCATAG 276 0.471 MVNGQKTWCVAKPSSDQATLLANLNYACSQVDCRILQRGCPCSSPDNLMNHASIAMNIYYQSRGRNHWNCDFRASGLVVVTDPSYGNCIYA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1318 91 PANTHER BETA-1,3 GLUCANASE 2 90 IPR044788 -
Ssu8g1318 91 Pfam X8 domain 7 75 IPR012946 -
Ssu8g1318 91 SMART X8_cls 7 90 IPR012946 -
Ssu8g1318 91 Gene3D - 1 89 - -
Ssu8g1318 91 PANTHER GLUCAN ENDO-1,3-BETA-D-GLUCOSIDASE-LIKE 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1318 Ssu-Chr8 24480989 24481517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1318 7 88 Glycoside Hydrolase AT2G05790 45.238 6.38e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1318 - - gmx:100804767 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1318 8 24480989 24481517 Ssu8g1318 8 24480989 24481517 ECH