Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1317 ATGCTTGGAGCTGTAGCAGCTTCCACCACACTATGCTTTTCACCATGCACAAACTCCACCAGAATTGTTGTTCTCAAAAGAATCTCAAATTCAACACTAACATTGAGCCATGGTCACTCTTTCTCACTCTTATCAACTACCCCTATGCATTTCTCTTTGCACAAGAGCAGTAAAAGACAACCCCATTTTCTTGCACAAGCTGCTTCATCTTCTGCTGCAAATGCCGAATACGTGGAGGAACCAGCAACATATGTGAAATTCCAGACACGTTTGAGTTTTCCGGGTTGCTCAAATTCATTAACTTTGTTTGGAACTGGATACAGAGAGAAAGTTTTTGCGATTATTGGTGTCAAGGTCTATGCTGCAGGTTTGTATCTAAATCAATCTATCACGGACGGATTGAATGCATGGAAAGGGCAATCAAAAGATGCTATTCAAGGGAATTCTTCTTTGTTCAAGACCATTTTCCAATCTTCCTTTGAAAAATCATTGCAAATTATTCTTGTCAGAGATGTTGATGGTAAAACTTTTTGGGATGCCTTAAGTGATGCCATATCACCAAGAATTCCAGAACCCACAACTGCAGATGAAACTGCTTTGACCACTTTCCGTAGTGTCTTTCTTGATCGCCCTCTTAAGAAAGGAACTTTCATAATTTTGACTTGGTTGAACCCCGCCAGATTGCTTGTTTCTGTCTCCTCACAAGGGCTTCCATCTACTGTGGATGCTACAATCGAATCTGCAAATGTAGCTTCCGCTCTTTTTAATGTATTCCTTGGGGATAGTTCTGTTTCTCCCTCCTTGAAAGCTTCAGTGGCTGAAGGCTTGTCAAaagtactaaaataa 846 0.4043 MLGAVAASTTLCFSPCTNSTRIVVLKRISNSTLTLSHGHSFSLLSTTPMHFSLHKSSKRQPHFLAQAASSSAANAEYVEEPATYVKFQTRLSFPGCSNSLTLFGTGYREKVFAIIGVKVYAAGLYLNQSITDGLNAWKGQSKDAIQGNSSLFKTIFQSSFEKSLQIILVRDVDGKTFWDALSDAISPRIPEPTTADETALTTFRSVFLDRPLKKGTFIILTWLNPARLLVSVSSQGLPSTVDATIESANVASALFNVFLGDSSVSPSLKASVAEGLSKVLK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1317 281 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 22 280 - -
Ssu8g1317 281 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 22 280 - -
Ssu8g1317 281 Pfam Chalcone-flavanone isomerase 85 278 IPR016087 GO:0016872
Ssu8g1317 281 Gene3D - 87 258 IPR016088 -
Ssu8g1317 281 SUPERFAMILY Chalcone isomerase 77 281 IPR036298 GO:0016872
Ssu8g1317 281 Gene3D - 130 276 IPR016089 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1317 - - gmx:100804241 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1317 8 24467607 24473163 Ssu8g1317 8 24467607 24473163 ECH