Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1316 ATGAATTCACGTCGAGATGCAAAGTTGGTGAATGGTGATCCTTTGTGGTCTGCGTACAATGAATGTGACACAGAATATCGTTTGGTAACTCACTTTGGAGAGGAAGTACAGGGGGGAGGATGGAGGAAGTACAAGGGGAAGAGGAACAGTGGATTTTCCAATTACCTATTGACCCTGCATGACTGCATCAATGTTGCCAACTTTATGTTTAAACTTTCTGCCACTACCCACCTTCTCAAACGAACAATTTCTTGTCCACAAACATCCTCTGCTCAGAAGGTTCGAATGGCTGATATAGAAATTGAAGCCTCCCCACGCTACCATCCAGATAGAGATGTCAAAGAATCAATTGCAGTTGGTGTTTCAACCACAAGTGATGAAGATGAACAATCACTCTTCCTGCTTGTCCGTTGGAAATGGTGGTTTTTAGTAGTAATCAACATAGCCTTACTCTTGATGGGCCAATCTGGTGCAGTCTTGCTGGGGAGATTCTACTTTGACCAAGGTGGAGAAAGTATATGGATGGCAACTCTAGTACAAACTGTGGCATTCCCAATCCTTTTCCTCCCACTCTTCTTCTTTCCTCACCCCAAAAACCTCTCTGACACCACTGAACTCACCATGCACTCTTCTATTCACACTCTCATCATGGTTTACTTGCTTTTGGGTATCCTCTTAGCTGGGGATAACTTGATGTACACAATAGGGCTTCTATATCTTCCTGTTTCTACTTACTCCCTCATTTGTGCATCCCAACTTGCTTTCAATGCCATCTTTTCCTTCCTTATCAATTCTCAGAAACTCACCATGTCAATACTTAACTCTGTGATTCTTCTCACCCTATCAGCTTCACTTATAGCAGTTCATTCTGACTCCTCAGAGGATAGAACCAGGAATGTTACCAAGAACAAGCACATGGTTGGTATTTTGTGTACACTTGGTGCATCAGCAGGGTATGCCCTTTTGCTGTGCCTGATGCAACTATCATTTGAAAAGGTCTTAAAGAGGGAAACATTTTCTGTTGTCCTAGAAATGCAAATTTGGACATCTTTTGTTGCTTCGTGTGTTAGCATAGTGGGACTGTTTGCCAGTGGGGAAGGGCAGGGTTTGAAGGATGAAATGAGGAGATTCAAAGCAGGAAGAGAGGTTTACATATTGACCTTGGTTGGAACAGCTTTGGCTTGGCAGATTTGTTCTGTTGGAGTTGTGGGGCTAATCTATGTGGTGTCTTCATTGTTCTCCAATGTTATGAGCATGCTGAGCTTACCACTTGTTCCTGTTGCTGCAGTCCTTCTTTACCATGAACAAATGAATGGAGTCAAAATTGTGGCCATGTTGTTGGCCATCTTGGGTTTCAGTTCTTATATCTACCAAAATTATTTGGACGAAACCAAGTCCAAAGCAACAGCAATTCGTCCTACTGCCACCCCAGAAACCTCTATTTCTGGATAG 1452 0.4291 MNSRRDAKLVNGDPLWSAYNECDTEYRLVTHFGEEVQGGGWRKYKGKRNSGFSNYLLTLHDCINVANFMFKLSATTHLLKRTISCPQTSSAQKVRMADIEIEASPRYHPDRDVKESIAVGVSTTSDEDEQSLFLLVRWKWWFLVVINIALLLMGQSGAVLLGRFYFDQGGESIWMATLVQTVAFPILFLPLFFFPHPKNLSDTTELTMHSSIHTLIMVYLLLGILLAGDNLMYTIGLLYLPVSTYSLICASQLAFNAIFSFLINSQKLTMSILNSVILLTLSASLIAVHSDSSEDRTRNVTKNKHMVGILCTLGASAGYALLLCLMQLSFEKVLKRETFSVVLEMQIWTSFVASCVSIVGLFASGEGQGLKDEMRRFKAGREVYILTLVGTALAWQICSVGVVGLIYVVSSLFSNVMSMLSLPLVPVAAVLLYHEQMNGVKIVAMLLAILGFSSYIYQNYLDETKSKATAIRPTATPETSISG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1316 483 PANTHER PURINE PERMEASE 19-RELATED 123 473 - -
Ssu8g1316 483 PANTHER OS09G0467300 PROTEIN-RELATED 123 473 IPR030182 GO:0015211|GO:0016021
Ssu8g1316 483 Pfam Purine nucleobase transmembrane transport 143 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1316 Ssu-Chr8 24414838 24417790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1316 126 467 Organic Solute Cotransporters AT4G08700 51.714 2.69e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1316 - - gsj:114375891 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1316 8 24414838 24417790 Ssu8g1316 8 24414838 24417790 ECH