Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1305 atgaGCGCAACAACAACACTTTCAAGTTCAACACCACACCGCTGTTTGCACTCCAACACCCGAACCACGTTCCTCACCGTTACCCCAATTCAATTCCTCCCGTTCCGCACTCGCACTCATAACCAACCGCTCCTCTGTTTCTCTTCGTACCCGTCGCAGCCGCcgccggtggtggtggtggggtcCGCGAACGCCGACATCTACGTGGAGATCGACCGGCTGCCGCGCGAGGGCGAGACACTCGCGGCGAGGTCCGGCCAGACGCTCGCCGGCGGCAAGGGCGCGAACCAGGCCACGTGCGCCGCCAGGCTGTCGTACCCGACCTACTTCGTCGGACAGGTCGGCGACGACGCCTACGGGAACCTCGTCACGGACGCGCTTCGAGGGGGTGGGGTTCGCCTCGATAATCTCGCCGTGGTTGCATCTGCCCCAACGGGTCACGCCGTTGTGATGTTACAATCCAATGGACAGAACTCGATCATCCTCATCGGGGGCGCCAACTTGGTAGGCTGGCCCAATGCCCTGCCACGTCAGCATCTGGACCTCGTGGCCCAAGCTGGCATCGTTCTGATGCAGAGGGAGATCCCCGACGCCGTCAACTTTCAAGTCGCACAGGCTGCAAGGAATGCTGGTGTGCCAGTAGTGTTGGATGCTGGGGGCATGGATGGGCCATTTGCGCCGCAATTACtgaattttgttgatattttgaGTCCTAATGAAACTGAACTTGCACGCATTACGGGAATGCCGACAGAAAGTTTTGAAGAGATTGCACATGCTGCCTTGAAATGTCATGAATTGGGGGTTAAGCAAGTTCTTGTGAAACTTGGGGAAAAAGGGTCTGCCCTTTTTGTAGAAGGAGAAAAACCGATTCAGCAGCCTGCCATACTTGCTAAAACAGTTGTTGACACAACTGGTGCCGGTGATACTTTTACTGCTGCTTTTGCTGTGGCCTTGGTTGAGGGCAAGTCCAAAAAGGAATGCCTCAGATTTGCTGCTGCTGCAGCTTGTCTTTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGCCTGATAGGAAATCTGTTTGGATCTTCTTAATTGTCAATCAGAATACTCACAAAAGAGTTCACCATTCGAACTATCAGGAACAGAATAACTCTGTATGGCAGAGGCAAAGACCCTTGAAAATGGCAGCAAGGAAAACAAAATTCCTTTTACAGAGCATTTCTGCAAGATGGATTCTTCGGCATAATAGTTTGTTGTCATTGTAA 1251 0.5132 MSATTTLSSSTPHRCLHSNTRTTFLTVTPIQFLPFRTRTHNQPLLCFSSYPSQPPPVVVVGSANADIYVEIDRLPREGETLAARSGQTLAGGKGANQATCAARLSYPTYFVGQVGDDAYGNLVTDALRGGGVRLDNLAVVASAPTGHAVVMLQSNGQNSIILIGGANLVGWPNALPRQHLDLVAQAGIVLMQREIPDAVNFQVAQAARNAGVPVVLDAGGMDGPFAPQLLNFVDILSPNETELARITGMPTESFEEIAHAALKCHELGVKQVLVKLGEKGSALFVEGEKPIQQPAILAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAACLCVQVKGASPSMPDRKSVWIFLIVNQNTHKRVHHSNYQEQNNSVWQRQRPLKMAARKTKFLLQSISARWILRHNSLLSL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1305 416 CDD ribokinase 61 351 IPR011877 GO:0004747|GO:0006014
Ssu8g1305 416 SUPERFAMILY Ribokinase-like 55 356 IPR029056 -
Ssu8g1305 416 Hamap Ribokinase [rbsK]. 55 357 IPR011877 GO:0004747|GO:0006014
Ssu8g1305 416 PRINTS Ribokinase signature 59 80 IPR002139 GO:0016301
Ssu8g1305 416 PRINTS Ribokinase signature 158 171 IPR002139 GO:0016301
Ssu8g1305 416 PRINTS Ribokinase signature 86 105 IPR002139 GO:0016301
Ssu8g1305 416 PRINTS Ribokinase signature 272 283 IPR002139 GO:0016301
Ssu8g1305 416 PRINTS Ribokinase signature 228 243 IPR002139 GO:0016301
Ssu8g1305 416 Gene3D - 54 360 IPR029056 -
Ssu8g1305 416 Pfam pfkB family carbohydrate kinase 57 351 IPR011611 -
Ssu8g1305 416 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 303 316 IPR002173 GO:0016773
Ssu8g1305 416 PANTHER SUGAR KINASE 53 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1305 K00852 - gmx:102666284 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1305 8 24111295 24114374 Ssu8g1305 8 24111295 24114374 ECH