Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1294 ATGCTTGGGCTAGACGTGTCATCATCGCAAACCATATGCATTGAGGTTGGCATGCAGAACTCAGTTCTTGGTGTTGTTCTGGCTACCAAACACTTCGGAGATCCCCTAACCACAGTACCTTGTGCTGTTTCAAGTGTGTGCCAGTCAATATTTGGTAGCATCCTTGCAGGAATTTGGAGACACTATGTGCTGGCTGAGATGAAGGACTGA 210 0.4714 MLGLDVSSSQTICIEVGMQNSVLGVVLATKHFGDPLTTVPCAVSSVCQSIFGSILAGIWRHYVLAEMKD 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1294 69 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 1 68 - -
Ssu8g1294 69 Gene3D - 1 62 IPR038770 -
Ssu8g1294 69 PANTHER SODIUM-BILE ACID COTRANSPORTER 1 68 IPR004710 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1294 1 69 Organic Solute Cotransporters AT1G78560 72.464 1.55e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1294 K03453 - ini:109187821 114.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1294 8 23603623 23603946 Ssu8g1294 8 23603623 23603946 ECH