Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1286 ATGGAATCAGCAACATGGAGTAGTCTCCTCTCTCTTTCCATTTCTAATTCCCCTTCCCATTCACGCCATCCCTCCCCATACAAAATTATGGCATTTTCAACTCTCCACACTTTCCCACtcccttccttttcttttccccaCCTCTTTCCCTTCCACCTCACACCCCCTCTTCTCTCTCCAAGACCCACCACTCCACTCCTCAACCCTCGCCCTCTTCGTCCGTCCCCTCCTCGCAACAACATGCCCGCTTCGCGCATCCAAGACGCCGTTGGAGGAGCAATGGCCCTCGTCCAATCGTCTCCCGCCACGTGGCAGTCCGCGCTTCTCAGCAACGCGCTGATCTTCCTCGTGGGCTCTCCCATTCTGGTCACCGGCTTGTCTCTCTCCGGCATCGGTGCCGCGTTCCTGCTCGGAACGCTCACTTGGCGGGCTTTTGGGCCTTCTGGGTTCTTCCTCGTTGCCACCTACTTTGTTATTGGTACAGCTGCGACAAAGGTCAAAATGGCACAGAAAGTGGCTCAGGGGGTTGCtgagaaaagaagaggaagaaggggTCCGGGCAGTGTTATTGGATCCAGTGCTGCTGGTTGCATTTGTGCTTTCCTCGCGATATTTGGTGTTGGGGGAGAGGCATTTTCTCAGCTTTGGAGACTCGGGTTTGTTGCCAGTTTCTGTACCAAGTTGAGCGACACTGTCTCAAGTGAGATAGGGAAGGCATATGGAAAAACAACGTACCTAGTTACAACACTCAAGGTAGTTCCAAGAGGCACAGAAGGGGCTGTTAGTGTGGAAGGAACCCTGGCTGGGATTTTAGCATCCATACTTCTTGCTTTTGTCAGTTTTCTCATGGGTGAGGTTGGCTCACATGAAGCAATTATTTGTGTACTAGCTTCTCAGATTGCTAATCTTGGTGAGAGCATAATTGGTGCTGCACTTCAAGAGAAGGAAGGATTTAAATGGCTTAACAATGATGCAgtcaatatcatcaacatatcaATGGGCAGTATCATAGCGGTCTTAATGCAGCAAGCCCTCCAGATCTGGAGTTCCTAA 1053 0.4815 MESATWSSLLSLSISNSPSHSRHPSPYKIMAFSTLHTFPLPSFSFPHLFPFHLTPPLLSPRPTTPLLNPRPLRPSPPRNNMPASRIQDAVGGAMALVQSSPATWQSALLSNALIFLVGSPILVTGLSLSGIGAAFLLGTLTWRAFGPSGFFLVATYFVIGTAATKVKMAQKVAQGVAEKRRGRRGPGSVIGSSAAGCICAFLAIFGVGGEAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKVVPRGTEGAVSVEGTLAGILASILLAFVSFLMGEVGSHEAIICVLASQIANLGESIIGAALQEKEGFKWLNNDAVNIINISMGSIIAVLMQQALQIWSS 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1286 350 PANTHER TRANSMEMBRANE PROTEIN 19 97 345 - -
Ssu8g1286 350 PANTHER TRANSMEMBRANE PROTEIN 19 97 345 IPR002794 GO:0016021
Ssu8g1286 350 Pfam Integral membrane protein DUF92 114 334 IPR002794 GO:0016021
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1286 - - gmx:100791489 509.22
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1286 8 23353839 23359353 Ssu8g1286 8 23353839 23359353 ECH