Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1281 ATGGTGTTCACACTCTGGTTGGGTCCTCTGATAGTAGCCTCAGCTTTTGTATGGGCAGTGGCAACTTCTCCACCATACCAAGGATGTGATTTTTCTCAAGGGAGATGGGTCATTGATGAAGCCTCCTTCCACCCTCTCTATGATGCCTCAAGGGACTGTCCTTTCATTGGCCAGGGATTTGATTGCTTAAGAAATGGCAGGCCTGATAAGGGGTACCTCAAGTATAGATGGATGCCCTCTAGTTGTGAACTTCCAAgGTTTGATGGTAGGAAATTCTTGGAGAGAAACACAGGAAAGAAGATAATGTTTGTCGGGGACTCCATAATCCCAAACTCAAATTACACCTTAACAAGTCAAACACAGGAACTTTCTGTGTTCTCATTTCCGGAATATGGAGCTTCAATCATGTGGTTGAAAAATGGGTTCCTAGTGGATTTGGTTTATGATAAAGAAAAAGGCAGGATTTTGAAATTGGACAGCATTAGCTCCGGGGACCAGTGGAAAGAAGTGGATGTTTTGATTTTCAATACCTACCATTGGTGGACTCACACGGGACAGTCTCAAGCGTGGGATTACTTTCAAGTGGGCAATGTATTAATCGAGGACATGGATCGCATGGAAGCTTTCAAAATTGGGCTGAGTACATGGGCTAAATGGGTTGATTCTAACATTGATCCTTCAAAGACTAGAGTCTTGTTTCAGGGAATCGCTGCTTCCCATGTTGAGTAA 729 0.4348 MVFTLWLGPLIVASAFVWAVATSPPYQGCDFSQGRWVIDEASFHPLYDASRDCPFIGQGFDCLRNGRPDKGYLKYRWMPSSCELPRFDGRKFLERNTGKKIMFVGDSIIPNSNYTLTSQTQELSVFSFPEYGASIMWLKNGFLVDLVYDKEKGRILKLDSISSGDQWKEVDVLIFNTYHWWTHTGQSQAWDYFQVGNVLIEDMDRMEAFKIGLSTWAKWVDSNIDPSKTRVLFQGIAASHVE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1281 242 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 84 242 IPR026057 GO:0016740
Ssu8g1281 242 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 241 - -
Ssu8g1281 242 Pfam PMR5 N terminal Domain 28 83 IPR025846 -
Ssu8g1281 242 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 241 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1281 Ssu-Chr8 23199931 23201258 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1281 - - gmx:100818058 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1281 8 23199931 23201258 Ssu8g1281 8 23199931 23201258 ECH