Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1279 atgttagaTGGGGAAGAAGATTCTTTTTCCGTCCGGAAAAGAGATGGTGGTGTAAGAAATTGTTTGCAGTGCAACCGTAAGGGATGGACAACGTGGGGTAAGGAGTATAAGGTTAAAGTGATGCTAGATAGGAACGTGTATCTAGTTGACGTTGTCAAAGAGAACATTGGCAGGGTCTTGAAGCTTGATTCAATAGAAGGAAGCAAGCTGTGGCATGGGGTTGATATGCTTATCTTTAACACGTGGCACTGGTGGTCCCGTAGAGGACCCACTCAACCATGGGATTATATCGAACTGGGAGGTCTAGTTTTGAAAGACATGGATCGGATGAAGGCTTTTGAAGAAGCACTTAGGACGTGGGCTGCATGGGTAGACGCCACCGTTGACCCTACGAAAGTGAAGGTCTTCTTTCAAGGAATTTCCCCATCTCACTACAATGGCAGCCTATGGAATGAACCATTTGCAAGGAGCTGCATCCGGCAGAGGACACCGGTGGCTGGATCGACATATCCCGGTGGTTTGCCACCGGCGGTGGCGGTGTTAAAGAGTGTGCTGAGCACAATCAAGAAACCAGTCACACTGCTTGACATCACAACCCTCTCACTGCTTCGAAAAGATGGACACCCTTCCATATATGGACTCACTGGACCCGCGGGAATGGACTGCAGCCATTGGTGTCTTCCTGGTGTTCCAGATACTTGGAACGAGATACTTTACAACCTTATTTGA 729 0.4787 MLDGEEDSFSVRKRDGGVRNCLQCNRKGWTTWGKEYKVKVMLDRNVYLVDVVKENIGRVLKLDSIEGSKLWHGVDMLIFNTWHWWSRRGPTQPWDYIELGGLVLKDMDRMKAFEEALRTWAAWVDATVDPTKVKVFFQGISPSHYNGSLWNEPFARSCIRQRTPVAGSTYPGGLPPAVAVLKSVLSTIKKPVTLLDITTLSLLRKDGHPSIYGLTGPAGMDCSHWCLPGVPDTWNEILYNLI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1279 242 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 26 240 IPR026057 GO:0016740
Ssu8g1279 242 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 34 242 - -
Ssu8g1279 242 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 34 242 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1279 Ssu-Chr8 23083470 23085597 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1279 - - var:108332447 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1279 8 23083470 23085597 Ssu8g1279 8 23083470 23085597 ECH