Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1256 ATGGGTATCCTCAGCACCCTCTTCTCTCGCCGCACCCCCTCCCTCCTCAACCCCCAAACCCTCAAACCCCCTCCCAGACCCACCACGTCCGAACCCCTTCCCCCACTCGGCCCAACCCCCCAAGCCCGGCCCACCAAGAGGCCCCTCCACGTCCTCTTCGCCGAAGCCGTGGGCCTCTCGGAAAAAACCGCCCCCACCGATGACGAAGCATCGGAGACCGCAACCGAACTGAAGAACAACCTGAGGCAGCTGGAGCAAGAGGTCAAGACCTTCAAAGAGAAAGCAAAAGGGGTTCCCCAGAAGAGAAGCTTATACGCTGCGTTTACCTACCAACAGCCTCCCGCGCTGAGGGAACCGAAACGAAAGGAACCAGAGGTTTTCAAGGAGCTCTCCCCCGATATGGTGATGTTTGCGCAGTACTTGTACGAGAAGGGGTATTTCAACGACGCCAATTTCGCCAAGGGGAGGAAAAGCTTTGACCCTGCTTGGTTCACGAATTTCTTCGCCGTGGGTTATGTCAAGTTTGCCGCCCGGAAATTCGCCAGAGATAACCAAGAAATTGCCAAATGGCTATCAGGAAGTGCCTTGAAGCAAGTGGCCGTGTTTGGTTGCCCCTCCACCCACCGGAGTGGTGTCTTTCCTGCTAAAAAACTGCGAAAATTTCTTGAGGTTCCAGAAAACACGGTTTGCAGTGGATGCTCTCTGCAACAATCATGCAAGTTTGTGAATCAAAGTGTGTGGAAATTTAACACCAATAATTTGGATTTAGTGACAGTTATGGAGGTTATTACTTCATATGCTTTAGAGTCGGTGGACCCCCAGCTGGTAGTGCCTGATGAAGTAAAGAAGTCAGTAAGTCAATTGCTGAAGGAGGTTCTGAAACTGAGTCAAACTACCTGA 900 0.5211 MGILSTLFSRRTPSLLNPQTLKPPPRPTTSEPLPPLGPTPQARPTKRPLHVLFAEAVGLSEKTAPTDDEASETATELKNNLRQLEQEVKTFKEKAKGVPQKRSLYAAFTYQQPPALREPKRKEPEVFKELSPDMVMFAQYLYEKGYFNDANFAKGRKSFDPAWFTNFFAVGYVKFAARKFARDNQEIAKWLSGSALKQVAVFGCPSTHRSGVFPAKKLRKFLEVPENTVCSGCSLQQSCKFVNQSVWKFNTNNLDLVTVMEVITSYALESVDPQLVVPDEVKKSVSQLLKEVLKLSQTT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1256 299 PANTHER ZINC FINGER PROTEIN 56 294 - -
Ssu8g1256 299 MobiDBLite consensus disorder prediction 18 42 - -
Ssu8g1256 299 MobiDBLite consensus disorder prediction 1 49 - -
Ssu8g1256 299 MobiDBLite consensus disorder prediction 1 17 - -
Ssu8g1256 299 Coils Coil 67 94 - -
Ssu8g1256 299 PANTHER OS01G0203300 PROTEIN 56 294 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1256 162 296 EF-hand Containing Proteins AT1G55040 31.469 4.04e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1256 - - gmx:100796418 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1256 8 22443428 22446275 Ssu8g1256 8 22443428 22446275 ECH