Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1246 ATGCCAAACGACAGCGTTTGCAGCCTTTTCTTCCTTGTTGCCCTCTTCACATGCCTTCTCTCTGCTAATGCCCAGCGTGACCACATTTTTCTACCGAGTGAACTCTATGACGATGACTCACTGAGTTCGTCCACGGCGAGTTGCCTGCCAACCGACCCCAACCTTAACTACAAGCCAGTAATCGGAATCCTGTCCCACCCCGGCGACGGCGCCTCCGGCCGCCTCAGCAACGCCACCGGCGTTTCTTACATCGCCGCTTCCTACGTTAAATTCGTAGAGTCCGGTGGTGCTAGAGTTGTTCCCCTTATCTACAATGAGTCACCGGAGAACCTTAAAAAGAAGCTCAATTTGACTAATGGAGTGCTCTTCACTGGTGGGTGGGCTGCAAGTGGTCAATATTTGGAAACTCTTCAATACATTTTTGAGAAAGCTTTAGCGAAAAATAAAGCTGGAGACCATTTCCCAACAATTGCCATCAACTTAGGTGCAAACCTCATAATAAAGATCGTAAGCGAGCTAACTGATGTTCTTGAACAATTTAATGCATCGAGTTTGCCAAGTTCTCTTCAATTGAGGAAGAATGCACTTGATAAAGGAAGTGTATTTCAAAGatTTCCTCCAGATTTGTTGAGCCAGATGGAGACAGATTGTCTTGTCCTGCACAATCAACGTTATGGCATATCCCCACGCAAGCTTCAAAATAATACGAAGTTATCGAACTTTTTTGAGATTTTGACGACATCTAAGGATAAAGATAATAAGACTTTCGTTTCCACAGCACGTGGTAAGAACTATCCTGTGACTCTTCTCCAATGGCATCCAGAGAAAAATGCCTTTGAATGGGCCACATCTTTGAAAGCCCCTCACACAGAGGATGCCGTTCGGGTTACTCAGTCCACTGCAAACTTTTTCATAAGAGAAGCTAGGAAATCCTCAAACACACCTGATGCTCAAGAAGTGCGAGATAATCTCATTTACAATTACAAACCTACTTATGGTGGAACGGCTGGGAAAGGATATGATGAAGTTTATCTCTTTGAACTCTAA 1047 0.4441 MPNDSVCSLFFLVALFTCLLSANAQRDHIFLPSELYDDDSLSSSTASCLPTDPNLNYKPVIGILSHPGDGASGRLSNATGVSYIAASYVKFVESGGARVVPLIYNESPENLKKKLNLTNGVLFTGGWAASGQYLETLQYIFEKALAKNKAGDHFPTIAINLGANLIIKIVSELTDVLEQFNASSLPSSLQLRKNALDKGSVFQRFPPDLLSQMETDCLVLHNQRYGISPRKLQNNTKLSNFFEILTTSKDKDNKTFVSTARGKNYPVTLLQWHPEKNAFEWATSLKAPHTEDAVRVTQSTANFFIREARKSSNTPDAQEVRDNLIYNYKPTYGGTAGKGYDEVYLFEL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1246 348 Pfam Peptidase C26 59 275 IPR011697 GO:0016787
Ssu8g1246 348 Gene3D - 54 347 IPR029062 -
Ssu8g1246 348 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 50 347 IPR015527 GO:0008242
Ssu8g1246 348 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 40 346 IPR015527 GO:0008242
Ssu8g1246 348 SUPERFAMILY Class I glutamine amidotransferase-like 78 335 IPR029062 -
Ssu8g1246 348 PANTHER FOLATE GAMMA-GLUTAMYL HYDROLASE 40 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1246 Ssu-Chr8 22197508 22206157 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1246 K01307 - gmx:547881 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1246 8 22197508 22206157 Ssu8g1246 8 22197508 22206157 ECH