Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1242 ATGGCGCAGACCCAAACCCTATCCTTCATTCACGAGATCGAATCTCTTGTCTCCGATAAACTTCAAGTGGTTTCGTACAAATGGCTGAGTCGCAATTATATGGTATCGTCCGATGAAGCAAAGAGGTTGCTTCAGGAGTTTGTGCAAAAACATGAGGGTGGGTTGGAGGTGGTGTATGCTCTGTCTGGCTGGTTAAAGAGCAACCATCCTAGCTACCATGTAAGGCTTGTTACCGGGCCAAAGCTTGCAGAAGCACAACAAGAATTTGATGGGGATTGCTCGGTTCAGGTATATAGTGTGCAAGCTAGCATTCCAAAGGATCCAGCTGTGCTTTGGAATGCTGAATTCATTCAAGCAGAAGAGCTTTTCAAGCAGCCTTCCTCAGTTGACAATTGTTTGAGGGATAATAGGTTCTGTGGGATCTCTAATTCTTTTGTAGAACGGAATGTGGATGGCCCCACAGTATTTTCTGCAGCTCCACAGTCAAAATCTATAGTAGGCGAGGGACCAACAAAGAGTAACACAGTTCACCATCCTCCTAAAAATGTAGCATGTGATTCTATTTACAAAGTCGATACCAAACCACAGAATGTCGTAAAAGATGTCAAGAGTGAAAGCAATGGTATGGGGAATTCTGTAGTTCTTGATAACATCAACAAACCTACTGCAGACAAAGAAAAGGCCCTTCCCTTACCCACAGGCAAAAAGAAAGTACAAGCTGATAAAAGTGGTTCTGTTACTGGAGGTTCATTAGCAAGCTTTTGGGGGCGTGCATCTGCAAAACCCAAGCCTCACTCCCCACCAGCTGAAAATAATAACACAATTTCAAATCCTGCTGTAGCTACTGAAGATGGCCAAACTTCTGCTCGGGAAGCAGAAGAGTCTGACAGTGGTAATGATGATAATCAAGATGTCTCCTTGAGAAGGTCATCCAATAGGAAAAGAAGGGTTGTCTTTGATTTCtcagatgaagatgaagatgaagttGTCAATTTAGCTTCACCTGATTTCCCAAATAAACAATCATCTCAAGATTCTAGACTAAATGACAAAAAATCATCAGATAAAGCCACTTTGAATTTTGACTCTCAGGAAGAAAATAAACCAAGGGTTAAGGAAGAGAGAGCAACTGACCAAAAAGCTCACTTACCACTGAGAGAAAATGTATCAGCTATCAGCAAGTGCACAAATACTGGGAAATCATCTTCTGAGAAGTTGCACAGTTGTGCCCCTGAAGTTTGTGTAAATAAGGATAGTGTAAACAATGCCCCTCCATGTTCACCCAAGAGGAGAAAAGTGATGAAGACCATGATTGATGAACGAGGGAGAGAAGTAACTGAAGTAGTCTGGGAGGGGGAGGAGACAGAAGAGAAGAAACCTGATAAGGTTACAACAAAGAAATCTGACAGTAATGCATCTACCAAAGCTGTCAATAGTGCTCCAGCAACTAAGAAGCCACCAGCTAATTCAAATACCATTAGTGGAAAAGGAGGAAACAAGAAGGCAGGAAACTCAAAGGATCCCAAACAGGGCAATATACTTTCATTTTTCAAGAGAGTTTGA 1563 0.4159 MAQTQTLSFIHEIESLVSDKLQVVSYKWLSRNYMVSSDEAKRLLQEFVQKHEGGLEVVYALSGWLKSNHPSYHVRLVTGPKLAEAQQEFDGDCSVQVYSVQASIPKDPAVLWNAEFIQAEELFKQPSSVDNCLRDNRFCGISNSFVERNVDGPTVFSAAPQSKSIVGEGPTKSNTVHHPPKNVACDSIYKVDTKPQNVVKDVKSESNGMGNSVVLDNINKPTADKEKALPLPTGKKKVQADKSGSVTGGSLASFWGRASAKPKPHSPPAENNNTISNPAVATEDGQTSAREAEESDSGNDDNQDVSLRRSSNRKRRVVFDFSDEDEDEVVNLASPDFPNKQSSQDSRLNDKKSSDKATLNFDSQEENKPRVKEERATDQKAHLPLRENVSAISKCTNTGKSSSEKLHSCAPEVCVNKDSVNNAPPCSPKRRKVMKTMIDERGREVTEVVWEGEETEEKKPDKVTTKKSDSNASTKAVNSAPATKKPPANSNTISGKGGNKKAGNSKDPKQGNILSFFKRV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1242 520 MobiDBLite consensus disorder prediction 266 284 - -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 446 520 - -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 202 311 - -
Ssu8g1242 520 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 519 IPR019038 GO:0005634|GO:0006260|GO:0043625
Ssu8g1242 520 MobiDBLite consensus disorder prediction 329 382 - -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 345 382 - -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 446 468 - -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 202 218 - -
Ssu8g1242 520 Pfam DNA polymerase subunit Cdc27 23 519 IPR019038 GO:0005634|GO:0006260|GO:0043625
Ssu8g1242 520 MobiDBLite consensus disorder prediction 469 511 - -
Ssu8g1242 520 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 146 IPR041913 -
Ssu8g1242 520 MobiDBLite consensus disorder prediction 287 311 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1242 K03504 - gmx:100812372 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1242 8 22104188 22109325 Ssu8g1242 8 22104188 22109325 ECH