Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1241 aTGGGTTGTACTGGATCTTCACAGTCCAACGCTGATGGGACAGTAAAAAAGATTCGAAAGCCTAAGCCTTGGAAGCATCCTCAGCCCATAACAAAGACTCAGCTAATTCAATTGCGTGATGAGTTTTGGGATACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCCGAGGCTGATCTAACTCTAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCCAAGTACGTTTTGAGCGAGCCAACTAACCTGATTCGGGACAGTTAA 345 0.4638 MGCTGSSQSNADGTVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1241 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
Ssu8g1241 114 MobiDBLite consensus disorder prediction 1 30 - -
Ssu8g1241 114 Gene3D - 31 104 IPR038169 -
Ssu8g1241 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Ssu8g1241 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1241 Ssu-Chr8 22098088 22102111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1241 - - gmx:100306399 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1241 8 22098088 22102111 Ssu8g1241 8 22098088 22102111 ECH