Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1236 ATGGCCAAAGACAAGTACAGGTCTTTCTTGCATGATGAACCTGAGAACATCCAGTGGAGACATGGTGGCCCTCCCACTTATGATGATGTTAACAAGCTTTTTGAAGAAGGAAGAACCAACGAATGGGCAGAAGGGTCGTTGGAGGAGACAGTGCAAAATGCTATCAAGTCATGGGAGATGGAGCTCTCACACAAGACCCGCTTGCAGGACTTCAAGACAATAAACCCTGAGAAGTTCAAGCTCTTTGTGAATGGCAGGGAGGGATTATCCGGAGAGGAAACTCTAAGCCTGGGAAGTTATAATGCTTTGTTGCAAAGTTCTCTGCCAGAAGACTTGAAGCCTTACAAAGTAGATGAAGAGACTTTTGAATCATCTCATGAAGCCTTCAGATCAGCTTTTCCTCGAGGGTTTGCTTGGGAAGTGATCAAAGTTTATAGCGGACCACCTGAAATTGCTTTCAAGTTTAGGCACTGGGGCTTCTTTGAAGGCCCTTTTAAGGGACATGCCCCTACTGGGAAGATGGTCCAATTCTATGGCTTGGGAACTGTCAAGGTGGATGACTCTTTGAAAGTTGAAGAGGTGGAGATTTACTATGACCCAGCAGAGATGCTTGGAGGCCTTCTATCAGGGAAGCACACAAAGTACCCCTTAGAGGATGGCACCAAAACTTCAGCAGCTTCCCAAGAATGTCCTTTCTCCAAACAATTACAATAA 714 0.4552 MAKDKYRSFLHDEPENIQWRHGGPPTYDDVNKLFEEGRTNEWAEGSLEETVQNAIKSWEMELSHKTRLQDFKTINPEKFKLFVNGREGLSGEETLSLGSYNALLQSSLPEDLKPYKVDEETFESSHEAFRSAFPRGFAWEVIKVYSGPPEIAFKFRHWGFFEGPFKGHAPTGKMVQFYGLGTVKVDDSLKVEEVEIYYDPAEMLGGLLSGKHTKYPLEDGTKTSAASQECPFSKQLQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1236 237 SUPERFAMILY NTF2-like 120 204 IPR032710 -
Ssu8g1236 237 Gene3D - 102 208 - -
Ssu8g1236 237 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 2 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1236 Ssu-Chr8 21961169 21962847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1236 - - gmx:100800305 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1236 8 21961169 21962847 Ssu8g1236 8 21961169 21962847 ECH