Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1212 ATGGCCCTCTCCGCCGTGAGGCAGCGACGCTCAGAGGCGTCCGATCCGTCGCCATCGCAACCGTACACGAAGCTGGACAAGCCTCAGAAATCGGAGGAGGAAAAAGATCGACAAGGGTTGGGGTGGTTTTTTCCGCTGGTGGCTCTTGGGTTTTTGAGGTACATGAGTGCCACCTCCAACATCATCCACGATTGCGACGAGGTCTTCAATTACTGGGAACCCCTTCATTACCTTCTCTACAAAACTGGCTTCCAGACATGGGAATACAGTTCACAGTTTGCTCTTCGGTCATATTTGTAccttttatttcatgaaatagTGGGTCGACCAGCTTCATGGTTGTTTAGTGAGGACAAAGTGAGAGTGTTCTATGCAGTGAGAATCTTTCTTGGTCTTCTCTCTGTTTTAACTGATACTGTTCTGGTGGTAGCTCTTTCAAGAAAGTATGGAAAACGACTTGCTTTGTATGCTCTTGCTATGCTGTGCTTAACCAGTGGCTGTTTCTTTGCAAGCACTAGTTTCTTGCCgagttcattttctatgtaTGCAATATCTCTTGTATCCGGTTTATTTCTTCTGGATAAACCTGCTGCAGCAATTTCTGTTGCTGTTATTGGTGTAATACTTGGCTGGCCATTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTGTCTAGAAAATTCAAACAGGCATTTATTGCTGGGGCTGTCACATCAGTTATTCTTCTTgCATTGTCAATAGTTACAGACTTCTACTATTATGGAAGATGGACTTCATctgtctttaatcttttaatatacaACGTAGCTGGAGGTGGTGAAAGCCATCTGTATGGGACTGAGGGGCCTCTTTATTATCTGAGGAATGGATTTAacaatttcaacttttgttttgttcttgctTTGCTGTTCTTGGGAATTTTGCCTATTGCAAAGAAGAAATATGCACCAGACCTACTGATTGTGATATCTCCTATATATATTTGGCTGGGGTTTATGTCTTTGCAGCCACACAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTGATTTGTGTTGCTGCTTCAGCTGTCATTGAGAGCTTCCCTGATCTTTTCCGTAGCAAATATAATCCATATGATCGTTCTATAATAGTGACAGTTGCCAAAGTTATGAGACCAGTGGCTCTTAGCCTTATACTATATGCTTCTCATGCCCGTACATTTTCTCTGATTCATGGTTACTCAGCTCCCTTGGAGGTTTACAAGATTTTGGAACACCATGACGCAGAAAACAGTTCTGTTCTTTGCGTTGGAAGTGAATGGCATCGCTTTCCATCATCATTTTTCATCCCAGATTACGTGGGACAAATTCGATGGATTGACGATGGATTCCGAGGTCTTCTTCCCTTCCCATTTAACTCTACCCTCGGGGGGACTGCAGCAGCACCGCCGTATTTTAACGATAAAAACATGGCATCAGATAAGCAATACGTATGTCCTCTTTAG 1494 0.411 MALSAVRQRRSEASDPSPSQPYTKLDKPQKSEEEKDRQGLGWFFPLVALGFLRYMSATSNIIHDCDEVFNYWEPLHYLLYKTGFQTWEYSSQFALRSYLYLLFHEIVGRPASWLFSEDKVRVFYAVRIFLGLLSVLTDTVLVVALSRKYGKRLALYALAMLCLTSGCFFASTSFLPSSFSMYAISLVSGLFLLDKPAAAISVAVIGVILGWPFSILAFLPVTLYSLSRKFKQAFIAGAVTSVILLALSIVTDFYYYGRWTSSVFNLLIYNVAGGGESHLYGTEGPLYYLRNGFNNFNFCFVLALLFLGILPIAKKKYAPDLLIVISPIYIWLGFMSLQPHKEERFLYPIYPLICVAASAVIESFPDLFRSKYNPYDRSIIVTVAKVMRPVALSLILYASHARTFSLIHGYSAPLEVYKILEHHDAENSSVLCVGSEWHRFPSSFFIPDYVGQIRWIDDGFRGLLPFPFNSTLGGTAAAPPYFNDKNMASDKQYVCPL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1212 497 MobiDBLite consensus disorder prediction 10 25 - -
Ssu8g1212 497 MobiDBLite consensus disorder prediction 1 36 - -
Ssu8g1212 497 Pfam Alg9-like mannosyltransferase family 49 447 IPR005599 GO:0016757
Ssu8g1212 497 PANTHER ALPHA-1,2-MANNOSYLTRANSFERASE ALG9 46 494 IPR039484 GO:0000030
Ssu8g1212 497 PANTHER GLYCOSYLTRANSFERASE 46 494 IPR005599 GO:0016757
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1212 1 494 Glycosyltransferase AT1G16900 72.545 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1212 K03846 - gmx:100805971 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1212 8 21585272 21590052 Ssu8g1212 8 21585272 21590052 ECH