Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1202 ATGCCTTCTTCTTCCCCCAAGTCCTTCCACCCTCGCCCTCCACCTCGCAGAACCTCCTTCATCCTTCTCTCGtgcctcctcttcctctccctctccGCTTTCTTCTTCGCTTTTCTCAGACCCCTTCGGGACCCTCCCTGCCCCAACCGCACCCCCAGATCGGTTCGAGTTATCTGGGACCACCGCCCCTCCACCGACCCCAACCCCGGGGTCCAGAACAGACACAAAATTATGGCCTTCGTGGGTATTCAAACCGGGTTCGGATCCGTGGCTAGGCGCCGATCTCTGAGGAACACTTGGTTTCCCTCCGATCCACATGGACTCCAaggCTTAGAAGAAGCCACTGGCTTGGCTTTTAGGTTCGTGATTGGTAGAACGAGTGATAGATCCAAAATGTCCGCACTTCAGAAGGAAGTGGCACAATATGATGATTTCATTCAACTGGATATTGAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTGGCTTTCTTCAAAGCTGCTTATGCACTTTTTGAAGCTGACTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGACCGTCTTTCATTACTGCTGGCAAAAGAGCGATCTCACCCTCAGACTTACATAGGATGCATGAAAAAGGGCCCTGTTTTCACTGATCCCAAACTCAAATGGTATGAGCCACTATCTAATTTGCTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATACGCTCTTTCTGCTGCTGTTGTATCAAGCTTGGTAGCACTTAAGAATAACAGtTTCCGGATGTTCAGCAATGAGGATGTTACAATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCTCCAGAGTGTACGTCCACATCAATTGCTGTGTGGGATATTCCAAAGTGTTCAGGTCTCTGTAATCCAGAAAAGAGAATGTTGGAACTCCATCAAAGGAAAGTTGTACTCAGAGTCCAACTGTGGAATCTGATGAATAGTATTTGGCCCATATATTTATGA 1029 0.448 MPSSSPKSFHPRPPPRRTSFILLSCLLFLSLSAFFFAFLRPLRDPPCPNRTPRSVRVIWDHRPSTDPNPGVQNRHKIMAFVGIQTGFGSVARRRSLRNTWFPSDPHGLQGLEEATGLAFRFVIGRTSDRSKMSALQKEVAQYDDFIQLDIEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSAAVVSSLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPECTSTSIAVWDIPKCSGLCNPEKRMLELHQRKVVLRVQLWNLMNSIWPIYL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1202 342 PANTHER HEXOSYLTRANSFERASE 4 327 - -
Ssu8g1202 342 Pfam Galactosyltransferase 91 285 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ssu8g1202 342 Gene3D - 72 309 - -
Ssu8g1202 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 4 327 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1202 Ssu-Chr8 21473758 21485894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1202 3 321 Glycosyltransferase AT3G14960 70.427 6.13e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1202 - - gmx:100806694 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1202 8 21473758 21485894 Ssu8g1202 8 21473758 21485894 ECH