Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1199 ATGGCATTGCGTCATTTACGATTCTTCCCTCACACACTTCCTCTCACTCCCAAACCCAAACTCAACAATAACCGCTTCTCCTTCTTCCCTCCCTCACTCCCTCGCTCTTCGACCGCACTCATGGCCAACGCTCACAAGGTCTTGGTTCCGATCGCCGACGGCACCGAGCCTATGGAGGCCGTCATCACCGTCGACGTCCTCCGACGCTCCGGCGCCGACGTCACCGTCGCTGCTGCCTCCGCCAACCTCTCCGTCCAAGCTCTCCACGGCGTCAAGATCCTCGCCGACGCTTCCGTCTCCGACGTCGCCGACACCGCCTTTGACCTCGTCGCTCTCCCTggaGGGATACCGGGTGTTGAGAATCTGAGAGACTGTAAAGTTCTGGAAGGGTTGGTGAAGAAGCATGTTGAGGATGGACGGCTTTATGCTGCGGTGTGTGCTGCTCCTGCAGTAGTGCTTGGGCCTTGGGGTTTACTGAATGGGTTGAAGGCGACTTGTTATCCTTCATTGATGGAGAAATTGGCCTCTTACGCAGCCACTACTGTTGAGTCTAGGGTACAGGTGGATGGCAGAGTTGTGACCAGTCGTGCGCCCGGAACTACCATGGAGTTTGCCGTTGCACTGATTGAGCAGTTAATTGGAAAAGAGACAGCGGATGAAGTTGCAGGTCCACTGGTCATGCGTTCCAATCATGATGATGAACACACTTTTAAGGAGCTTAACCCAGTGCAGTGGACAGTTGACAATCCACCCAAGATTCTTGTACCAATTGCTAATGGTTCTGAGGAAATGGAAGCTGTGATTATTATTGATATTCTGAGAAGAGCAAAGGCAAAGGTTGTGGTTGCTTCTGTTGAGGATACACTAGAGATTGTGGCATCACGCAAAGTTAAACTGGAGGCAGACATGCTCCTTGATGAAGCAGCCAAACTTTCATATGACCTTATTGTGTTGCCTGGTGGACTTGGTGGTGCCCAAGCTTTTGCAAACTCAGAAACCTTGGTGAGTTTGCTGAAAAAGCAAAGAGAATCAAACAAATATTATGGAGCAATTTGTGCGTCTCCAGCTTTAGTCTTGGAGCCCCATGGCTTGCTGAAGGGTAAAAAGGCCACTGCCTTTCCTGCACTGTGCAACAAGTTATCAGATCAGAGTGAAGTAGAAAACAGGGTGGTAGTTGATGGCAACCTTATTACCAGCAGAGGCCCAGGAACCTCCATCGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCACTAGAACTAGCGAAGACAGTAGTGTTCACACGCCTGTAG 1305 0.505 MALRHLRFFPHTLPLTPKPKLNNNRFSFFPPSLPRSSTALMANAHKVLVPIADGTEPMEAVITVDVLRRSGADVTVAAASANLSVQALHGVKILADASVSDVADTAFDLVALPGGIPGVENLRDCKVLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGLKATCYPSLMEKLASYAATTVESRVQVDGRVVTSRAPGTTMEFAVALIEQLIGKETADEVAGPLVMRSNHDDEHTFKELNPVQWTVDNPPKILVPIANGSEEMEAVIIIDILRRAKAKVVVASVEDTLEIVASRKVKLEADMLLDEAAKLSYDLIVLPGGLGGAQAFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKKATAFPALCNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELAKTVVFTRL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1199 434 Pfam DJ-1/PfpI family 252 414 IPR002818 -
Ssu8g1199 434 Pfam DJ-1/PfpI family 45 211 IPR002818 -
Ssu8g1199 434 TIGRFAM not_thiJ: DJ-1 family protein 252 427 IPR006287 -
Ssu8g1199 434 TIGRFAM not_thiJ: DJ-1 family protein 46 223 IPR006287 -
Ssu8g1199 434 CDD GATase1_DJ-1 47 212 - -
Ssu8g1199 434 PANTHER BNAA06G01020D PROTEIN 43 429 - -
Ssu8g1199 434 SUPERFAMILY Class I glutamine amidotransferase-like 45 232 IPR029062 -
Ssu8g1199 434 Gene3D - 39 239 IPR029062 -
Ssu8g1199 434 Gene3D - 246 433 IPR029062 -
Ssu8g1199 434 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 43 429 - -
Ssu8g1199 434 SUPERFAMILY Class I glutamine amidotransferase-like 250 431 IPR029062 -
Ssu8g1199 434 CDD GATase1_DJ-1 253 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1199 Ssu-Chr8 21436256 21440361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1199 K03152 - gmx:100803116 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1199 8 21436256 21440361 Ssu8g1199 8 21436256 21440361 ECH