Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1186 atgaatttaagTTGTCAGCTTGATTGTTTAGGATTCAGTTCTTATTGTAGAATTTTACTTTTGGAGCAGAGCAGATATGCAGTCCATTTGGAGTTCATGTTTTTCTGTCTTATGCAAGGCAATGCTGGTGATGCATACCAGCTTGCTCTATgCCTTGAGCAAGAAAAAGTTGATATTGATCCTGTGTCAAATATGATGATGGGTTTGACATTCTATGAGTTGTGGTATTCTTCTATCCCCAAAGAATTCCAGTGGAGAAATTCAGACCTGTTTGACTTGCAAGAGAACTCACATATGGAGGGAACCTCATTCAGCAATGAAACTGGACAGTCAGAGAGGTATAATTCAGTTGAATCCCACATGGCTGACTCACAATGTCAATGTGATTCAGATGCCTCTATCATGAATGATAAGCAGATATCGAGGAATGTTGTCTCCAATGAAGACATGGAGGTAGATgctaataaaagagaaaatccaCATCAGAACTTTCAGCCAGAAggtttttacttaaattctgaAGAGCATAAAGGATTTGGAGACCCTTTTTCTAACACTGGAGGTCTTACACAGGATATCTTGTATGGTCTTGGGGGACTTGATTTGTCGTTGCTGCCCTTGCGTTTTTCTGATGAGAACAGGTTTGAGGAGTTCATGTATTTGCAAAGAAATCAACCTAATGACTATTACAAAAATGCAGTGAAATATTTACAACTAGCTCTCAACTCAGAACCTTCTGCTTCAGCAGCATTACTTCCATTGATACAActGTTGCTGATTGGAGGTCAAGTTGATGAGGCTCTAAATAGGCTTGAGAAGCAGTGCTGTAATTCAGCCTCTGTACTTCCAATAAGAGTAAGGGCTGCTCTCTTGGAGCGTTTTGATCGAAACAACTCTCTCATGCTTCTTAGCTGTTTTGAGGATATATTGAAGAAGGATCCAACATGTGGTGATGCCTTGGCAAAACTTATCAAGATGCACCAAAATGGAGACTATAGTGTTGAATCTCTGCTGGAAATGATTGCTTTACATTTAGATGCTACAGATGCAGAATACAATACATGGAGGGTGTTCTCTTTATGTTTCTTGAGACTGTCTTCCTACGAAGAAGACTGTATGTCATCATGCCCCATTCAAAATGATGATGGACGTAAGCAACATTGTTCCTTTAACAAAACCCCTAAAATATTTACGGAGGGTATATCAGGAAAATCTTGGAGGCTTCGCTGTAGGTGGTGGCTAACAAGACATTTCAGCAATAGCAAGCTTGAATCAGAGATTGAAGctgGTGATTTGCAATTACTCGCATACAAAGCGGCATGTGCATCGTATATGTATGGACGGGAGTTCAGCTATGTTGCGAAGGCTTGTTttcatttagaaaaagaaaacgatAAGGAGTTGCTGTTGTTATTGGATGAGCACAGGGGAAATTCATTTggaatttatcaaaaatttcaaaagaaatttacaCATATAACATAA 1485 0.371 MNLSCQLDCLGFSSYCRILLLEQSRYAVHLEFMFFCLMQGNAGDAYQLALCLEQEKVDIDPVSNMMMGLTFYELWYSSIPKEFQWRNSDLFDLQENSHMEGTSFSNETGQSERYNSVESHMADSQCQCDSDASIMNDKQISRNVVSNEDMEVDANKRENPHQNFQPEGFYLNSEEHKGFGDPFSNTGGLTQDILYGLGGLDLSLLPLRFSDENRFEEFMYLQRNQPNDYYKNAVKYLQLALNSEPSASAALLPLIQLLLIGGQVDEALNRLEKQCCNSASVLPIRVRAALLERFDRNNSLMLLSCFEDILKKDPTCGDALAKLIKMHQNGDYSVESLLEMIALHLDATDAEYNTWRVFSLCFLRLSSYEEDCMSSCPIQNDDGRKQHCSFNKTPKIFTEGISGKSWRLRCRWWLTRHFSNSKLESEIEAGDLQLLAYKAACASYMYGREFSYVAKACFHLEKENDKELLLLLDEHRGNSFGIYQKFQKKFTHIT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1186 494 Pfam TAF RNA Polymerase I subunit A 18 456 IPR039495 GO:0000120|GO:0006360
Ssu8g1186 494 PANTHER TAF RNA POLYMERASE I SUBUNIT A 23 489 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1186 - - gmx:100819662 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1186 8 21130277 21136089 Ssu8g1186 8 21130277 21136089 ECH