Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1183 ATGCGGATTCCGAGCAATCGCCGTTTCACAAGAATCACGCCCACGCCCTCTGCTTCCAGTTACCGCCGTCTCAAGTCCTACGTGTCCGACTGCAGAGCCGTGCTTCTTCCTTCCTTCGGCGGGCCGCACGTGCTCGAGCTTCGCTCGCACGTACCGGTCCCGCCTCTGAAGCCGCACGAGGTCCTCGTTCGCGCGCGCGCCGTTTCCGTCAACCCCTTGGACACACGAATTCGTGCCGGTTACGGGCGTTCCATTTTCGAGCGGCTGTTGCCCGTCATTTTGGGGCGCGACGTCAGCGGCGAGGTTGCGGCGGTCGGAGCTTCGGTGAGGTCGGTGAGTGTGGGGGAACAGGTTTTTGGGGCTCTGCATCCAACTGCTGTGAGGGGCACTTACACGGACTATGCGATTCTCTCGCAGGAGGAGGTTACTCCGAAACCAGATTCACTTACTCATGTGGAAGCCAGTGCCATTCCTTTTGCTGCACTGACAGCTTGGCGTGCTCTAAAAAGTACAGCCAGAATAAGTGAGGGACAAAGGATATTAGTAGTGGGAGGTGGAGGAGCAGTAGGGTTTGCTGCAATTCAGCTTGCAGTAGTGGGTGGTTGCTCTGTTGTAACTACTTGTGGAAGTCAAAGCATTGAGAGAATGTTAGCTGCTGGTGCTGAGCAGGCTGTTGATTATGTTGCTGAGGATGTTGAATTGGCTATAAAGGGGAAGTTTGATGCTGTTTTGGACACTATTGGTGTGCCAGAGACTGAACGGATGGGCATTAATTTTCTGAAACGAGGTGGATACTACATGACACTTCAGGGTGAGGCAGCATCATTGGCTGATAGGTATGGACTGGCTATTGGGCTTCCAGCAGCTACagcttttttattgaaaaaacagCTCCTGTATCGATACTCTCGTGGAATAGAATACTCATGGACATACATGAGGGCTGACTTAGAGGGTTTAATTGAGATTCGAAAGCTATGTGAATCTGGGAAGATGAAGATACCTGTGGATAAAACTTTTCCCATAACACAAGTAAAGGAGGCTCATGAGGCAAAAGACAAGAAGCTCATTCCAGGTAAAGTAGTACTGGAACTTGATTGA 1101 0.5068 MRIPSNRRFTRITPTPSASSYRRLKSYVSDCRAVLLPSFGGPHVLELRSHVPVPPLKPHEVLVRARAVSVNPLDTRIRAGYGRSIFERLLPVILGRDVSGEVAAVGASVRSVSVGEQVFGALHPTAVRGTYTDYAILSQEEVTPKPDSLTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGFAAIQLAVVGGCSVVTTCGSQSIERMLAAGAEQAVDYVAEDVELAIKGKFDAVLDTIGVPETERMGINFLKRGGYYMTLQGEAASLADRYGLAIGLPAATAFLLKKQLLYRYSRGIEYSWTYMRADLEGLIEIRKLCESGKMKIPVDKTFPITQVKEAHEAKDKKLIPGKVVLELD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1183 366 Gene3D - 157 335 - -
Ssu8g1183 366 Gene3D - 39 363 - -
Ssu8g1183 366 PANTHER PROTEIN AST1-RELATED 17 365 - -
Ssu8g1183 366 SUPERFAMILY GroES-like 29 181 IPR011032 -
Ssu8g1183 366 Pfam Zinc-binding dehydrogenase 220 363 - -
Ssu8g1183 366 SMART PKS_ER_names_mod 40 363 IPR020843 GO:0016491
Ssu8g1183 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 149 340 IPR036291 -
Ssu8g1183 366 PANTHER PROTEIN AST1-RELATED 17 365 - -
Ssu8g1183 366 Pfam Alcohol dehydrogenase GroES-like domain 58 120 IPR013154 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1183 K23164 - gmx:100799923 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1183 8 21083827 21089230 Ssu8g1183 8 21083827 21089230 ECH