LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu8g1182	atggaaacagAAAGAGAGAGACCCCATCGCAGCACAAGTAGCAATAGCAGCAGCACAAGCGAGTTGTTTGTTTGCTTCACTTCCCGTTTGTCCTCTTCATCCATGAAGCTGTCTTCCAAGTCCATTCTGAGCCCAAGCCGCAGCAGAGACCCTCCTCAGATTTCCCTCTCATCCTCCCTCAGCAGGAGGCTCAAGGGCAATGGCAGCATGAAGGGAGGGCAAGCCTCTCCCATGTTCCCAACCGGTGGCAAGAGAAGAGGCTGCGGCTTTGAGAACCCCGAACCTTCTTCTCCCAAGGTCACATGCATTGGCCAGGTGAGGGTGAAGACCAAGAAGCAAGGGAAGAAGATGAGGGCAAGGTCAAAGAGGAGAGGAGAGGCTAGCTTCAGGAAGGCAGAACAACAAGCTGGGGTTAATGCAAATGCAAATCCAGATCTCACCAGGCAAAACAGCCAAGGGTTTCAACATCACCAGAACTGCTTGAAGCATAGGAACCAGAGATGGGTTCATCTTCCCTTGACAATATGTGAGGCCTTGAGAGAGTTCAGCTGCTTCTTTCCTTGCAGGTCTTCTTGCATGTCAAGTGAGAGGGAGAAGgcgaaggagaaggagaaggagaaggagaagggtGGTGGAGTGGAAGGGGGAGGACATGGGAGAGAGGCTGCATTTGGAAGGTGGCTGGTGGCCTTGCAGGAAGGGGAAGGGAAGGGGAGGGGGATTGAGTTGGTTATGGAGGAGGAGGATGGAAGAGAGAGAGGTGGTGAGAGGAGTCACAGTCAGAGAAGGCATGTGTTTGAAGACATTGATGTTGATTTGGTGgtaggagaggaagaagagaagaagcaTGAGGAGTTGGtaggagaggaagaggagaaagCAAGAGTTAGCATATGCATCCCTCCCAAAAATGCTCTCTTGTTGATGAGATGCAGATCTGATCCTGTCAAGATGGCAGCTTTGGCTAACCGCTTTTGGGAATCACCTGTTCACAAAGACAAATGtcaagaagaagaacaagaagaagataGTGGAGatgaagaacaagaacaagaacaagaagaagaagaagaaggtgaCAAAGACCAACACATCCAAGTGAAGGAAGAAGATGAACAAGAAGAACAAGTTGAAAGAGAAACAACCAAAGAAGATAACATTTGTGAAAGAGAAACAGAAACTGCTGTTGTGGCCAGTGAAGAAGCAGCAGCAGCGGCAAAACAAGATATCGAGAACCCTAAAACCGAAGAAGAGGAGGCTAATCTCCAAGAGGGTAAaggggaagagagagaaaacgaCGAAAGCTCAGAACTTTCTTCCTCCCCAGAAACCTTCACAGTTTCAGAACGAGAAAACGACGAAGCGGAACCAGAAACGGCCGAAACTTCAGAAGGGTCAAcggaggaagaagagaaagtaACTGCGGAGTGGGATTCACAACCGGACCCGACCCGAAACTCGAATTCGGATCCGGAGTCAAAGGAGCGAGAAAACGGGTCAAAGCgcgaagagagagaaagagaaacgCTGCCGGAGTGCTTGTTGCTGATGATGTGCGAGCCGAAGCTGTCGATGGAAGTGTCCAAGGAAACGTGGGTGTGCAGCACCGACTTCATACGGTGGTTGCCGGAGAGACCCGCCGGCGCCGAGAAGAGGGTCGCCGGAGAGATGTGTACCAAGCCGAAGCCGAAACCGAAGCCCTCGCCACCGCTGATGCAGCCGCCGAGGTCGTCGTGCTCGTTCCCGGCGGCGGGGGGCGGCGCCGGAATGTCGATGGCGACGATGATAGAGCAGAAGCTGGCGGGCTCCAAATCGGGTAACAATGGGTACGAGCCGTTTGTGCTCACGCGCTGCAAGTCCGAGCCGATGAGGTCCTCGGCTAAGTTCGCTCCAGAGGCTTGTTTCTGGAATAATAGGAAGCTTGAGCCGCACCCTCCCGCGGCTCAGCTTGGAGTCGGCGCGCCGGCTGGTGTTGGGTTTTGa	1983	0.474	METERERPHRSTSSNSSSTSELFVCFTSRLSSSSMKLSSKSILSPSRSRDPPQISLSSSLSRRLKGNGSMKGGQASPMFPTGGKRRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRKAEQQAGVNANANPDLTRQNSQGFQHHQNCLKHRNQRWVHLPLTICEALREFSCFFPCRSSCMSSEREKAKEKEKEKEKGGGVEGGGHGREAAFGRWLVALQEGEGKGRGIELVMEEEDGRERGGERSHSQRRHVFEDIDVDLVVGEEEEKKHEELVGEEEEKARVSICIPPKNALLLMRCRSDPVKMAALANRFWESPVHKDKCQEEEQEEDSGDEEQEQEQEEEEEGDKDQHIQVKEEDEQEEQVERETTKEDNICERETETAVVASEEAAAAAKQDIENPKTEEEEANLQEGKGEERENDESSELSSSPETFTVSERENDEAEPETAETSEGSTEEEEKVTAEWDSQPDPTRNSNSDPESKERENGSKREERERETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPAGAEKRVAGEMCTKPKPKPKPSPPLMQPPRSSCSFPAAGGGAGMSMATMIEQKLAGSKSGNNGYEPFVLTRCKSEPMRSSAKFAPEACFWNNRKLEPHPPAAQLGVGAPAGVGF	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	196	219	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	12	65	-	-
	Ssu8g1182	660	PANTHER	CHLOROPLAST PROTEIN HCF243	419	660	-	-
	Ssu8g1182	660	PANTHER	CHLOROPLAST PROTEIN HCF243	5	441	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	134	151	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	110	125	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	488	508	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	557	576	-	-
	Ssu8g1182	660	Coils	Coil	335	358	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	325	508	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	379	396	-	-
	Ssu8g1182	660	PANTHER	CHLOROPLAST PROTEIN HCF243-RELATED	419	660	-	-
	Ssu8g1182	660	PANTHER	CHLOROPLAST PROTEIN HCF243-RELATED	5	441	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	196	215	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	562	576	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	410	437	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	1	96	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	339	359	-	-
	Ssu8g1182	660	MobiDBLite	consensus disorder prediction	110	151	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu8g1182	Ssu-Chr8	21074649	21076788	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu8g1182	-		-	gmx:100801731	801.201

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu8g1182	8	21074649	21076788	Ssu8g1182	8	21074649	21076788	ECH