Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1181 ATGTTGCACTCTCAGTGCCACCATCTTCTCTTTCCACTCCCACTCACGCACCATAAACCCCCTCTCTGTCTTCTTCCGCCATCATCCCCTCTTCACCACAAACCCACCATTCTCCACTCACTTTCAGCTTCAGCCATTCCTCCATGGCTCGCACAACTCACCAATGAAGCAGACACAGAGGGCCCCGTCGAACTCCCTTCTCTTCTACTCCTTCCATTTTCGCCACCACCGACGACCCTTCTCCCATTCAAATCGCTTCCAGTGTTCTCCTCACCGCCGCCATCTCCGTATTCCTCTTTCGCTCCCTCCGCCGCAGGTCTCAACGTGTCAAACAATCGGTCTTCAGGAGAGAAGTCGATAAAAGAAGAAGCATTGGATAGCTTGAAAGCTCTGGGGTCAGCTTCAGTCGATGCTAAGGGTCCACCTTCACCTGCTCAGGCATTGCTTGGGGGAATATCGGCCGGTATTATTGCTCTTATTCTCTTTAAGTTTGCCACTACCATAGAGGCAGCTCTAAACCGACAAACAATTTCAGATAACTACTCTGTCCGCCAGATAACCATCACCATAAGGACAATAGTGAATGGCTTGACATACCTTGCAACATTTGTTTTTGGCCTAAATTCCCTTGGTTTATTCCTCTATTCTGGCCAGCTTGCCATCAAATCCATTATGGAAGGTTCAACTGAAAAGGAAACTGAAAGTCAAAGCACTGATAAgtcaaatttatcaaattcatCCATTGAGAGTACCACAGATAACACTGAATTGAGCAGCAGGAAGGAAGAACAAAGTTCAAATGATGCACAATAG 813 0.4649 MLHSQCHHLLFPLPLTHHKPPLCLLPPSSPLHHKPTILHSLSASAIPPWLAQLTNEADTEGPVELPSLLLLPFSPPPTTLLPFKSLPVFSSPPPSPYSSFAPSAAGLNVSNNRSSGEKSIKEEALDSLKALGSASVDAKGPPSPAQALLGGISAGIIALILFKFATTIEAALNRQTISDNYSVRQITITIRTIVNGLTYLATFVFGLNSLGLFLYSGQLAIKSIMEGSTEKETESQSTDKSNLSNSSIESTTDNTELSSRKEEQSSNDAQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1181 270 MobiDBLite consensus disorder prediction 238 254 - -
Ssu8g1181 270 PANTHER OS02G0307800 PROTEIN 113 267 - -
Ssu8g1181 270 MobiDBLite consensus disorder prediction 255 270 - -
Ssu8g1181 270 MobiDBLite consensus disorder prediction 228 270 - -
Ssu8g1181 270 Pfam Protein of unknown function (DUF3082) 142 219 IPR021434 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1181 Ssu-Chr8 21062197 21070749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1181 - - gmx:100799393 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1181 8 21062197 21070749 Ssu8g1181 8 21062197 21070749 ECH