Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1180 ATGCAAAAGACTCCATATAAATTCAGAACACATAAAGGGGTGACAAAGTTGGAAAAGTGGAAACTCATGGAGCCAATTGGCAACTCTTGTGAGTCTTCTTTTTGCAGAGATGAAAAAATGGAAGCTGTGGATCTTTTGGAAGAGTGCTGGTTCTTTGATAACTTGTTAAAGACAAGACCAAGGATGACAAGGTGTCACTCTGATCCTTGCCCTTCCACTGGCCTAATCAGCCCCCCTGATTTTTTGGTGAAGGACTCTGATGTACCCTCTTCTTACTCATCACCAAGTAACCCACCAAACAATGGTGCTTTTGTTCATCCTAAGAAGATCCAGAGAGCACCATCCATGCCACCATTAAGATTGAGAGAAGAAGACCAAAAAGGAAGCAACTCTACTAGAAGCAAATTGGTGCACCAACCAACAGATCCTGTTGTGTTTCAGGCAGCTAGTAAACCTCATTGTGCACAGATGAAAGGACACCATAACAGTGGTTGTAATAGAAGGAAAAGCAAACTGCTAAGAACACCATCTTTGCCTCCATCCATAGGGAGAGAAGAAAAGTTCCAAGTAAATGATACTAGAACTGGCAGATCCCACAAGCAACCATCAACACCTACCCATATTGATATTCTTCCCCCCAGGCAAACCTCTAAGACTTGTAGCATTCCAAGATGTAGACTGGCTAGAAAGACTGAGGTTGAAAGCTTCAACACAGAGGGTATTACGGAGATGGGGCGCAGGTACCTGAATCAGAAAACAATGAGGAGAAGCCTAAGTGATCTTGAATTTGAAGAAGTTCAGGGGTTCAAGGATTTGGGTTTCTCATTTGAGAAAGAAGCCTTAAGCCCAAGTCTAGCTAACATACTGCCTGGTttgcaagagaaaaaaagagatgagacaGAAGAAGATAAGGCAGCAAGGAGACCATACTTATCTGAGGCTTGGTTGGTGCAAAGTTGTGCTCCTCCTATTCCAAATTGGGCTTCTCAAAAGTCTGCAGCTGACATGAAAGAGCAAATCAAGTTTTGGGCTAGAGCAGTGGCTTCAAATGTACACCAGGAATGCTGA 1068 0.4232 MQKTPYKFRTHKGVTKLEKWKLMEPIGNSCESSFCRDEKMEAVDLLEECWFFDNLLKTRPRMTRCHSDPCPSTGLISPPDFLVKDSDVPSSYSSPSNPPNNGAFVHPKKIQRAPSMPPLRLREEDQKGSNSTRSKLVHQPTDPVVFQAASKPHCAQMKGHHNSGCNRRKSKLLRTPSLPPSIGREEKFQVNDTRTGRSHKQPSTPTHIDILPPRQTSKTCSIPRCRLARKTEVESFNTEGITEMGRRYLNQKTMRRSLSDLEFEEVQGFKDLGFSFEKEALSPSLANILPGLQEKKRDETEEDKAARRPYLSEAWLVQSCAPPIPNWASQKSAADMKEQIKFWARAVASNVHQEC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1180 355 MobiDBLite consensus disorder prediction 155 215 - -
Ssu8g1180 355 PANTHER - 38 355 - -
Ssu8g1180 355 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 38 355 - -
Ssu8g1180 355 MobiDBLite consensus disorder prediction 87 101 - -
Ssu8g1180 355 MobiDBLite consensus disorder prediction 195 215 - -
Ssu8g1180 355 MobiDBLite consensus disorder prediction 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1180 Ssu-Chr8 21057749 21059209 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1180 - - gmx:100527250 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1180 8 21057749 21059209 Ssu8g1180 8 21057749 21059209 ECH