Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1174 ATGAACACGAACACGTGTCTCTTTCAACAGGTAGTTTCCATCGACAGTGCCACTGATATTGTTCTTTGTTTCTCTTTCCATCAAGCTTTCCGAGCAATACAACAAAGTGACGGTGGTGACATCAAAAGCAGAAGCAACAGAAagcaaaggagaaagaagatGGGAAGAATCTTTGTAGTGGAGCTTGAGGGCAGGTCTTACAGATGCAAGTTCTGCAGAACTCACTTGGCCCTTGCAGATGATCTCATCTCGAGGTCCTTTCATTGCCGGAGGGGAAAAGCATACCTATTCAATAATGTTGTGAACTTCACAATTGGAGCACTGGAAGAAAGGACAATGCTTTCAGGATTACATACTGTGGCAGATATTTTTTGCTGTTGCTGTGGTCAAATAATTGGCTGGAAATATGTAATCCTTCTCTCGTACCCTCTTTGA 435 0.4115 MNTNTCLFQQVVSIDSATDIVLCFSFHQAFRAIQQSDGGDIKSRSNRKQRRKKMGRIFVVELEGRSYRCKFCRTHLALADDLISRSFHCRRGKAYLFNNVVNFTIGALEERTMLSGLHTVADIFCCCCGQIIGWKYVILLSYPL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1174 144 PANTHER BNAA02G09980D PROTEIN 32 136 - -
Ssu8g1174 144 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 67 137 IPR004910 -
Ssu8g1174 144 ProSiteProfiles Yippee domain profile. 65 144 IPR034751 -
Ssu8g1174 144 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 32 136 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1174 Ssu-Chr8 20998160 21002436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1174 - - gmx:100813120 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1174 8 20998160 21002436 Ssu8g1174 8 20998160 21002436 ECH