Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1161 ATGCAGACAAGTAGGAGTTCAGATAGCACATTAACACACTTCCCCCCTTTGTTATCTCATCGTGAAGAAAACCCTAGTCCACGATGGTGGAACAAAATCCTGGACTTGGAGGAGGCCAAGCGTCAACTACTTTTTTCACTACCAATGTTCCTTGCTAACTTGTTCTATTACTTAATCACTTTGGTTTCTGTAATGTTCGCTGGCCACCTTGGCGAGCTTCAGCTTGCTGGTGCTACTTTGGCAAACTCATGGTTTAGTGTCACTGGTTTGGCGGTCATGGTGGGTTTAACTGGGGCACTGGAAACACTCTGCGGACAAGGATTCGGCGCAAAAGAGTACCGCATGTTGGGAATGTATCTGCAAGCCTCTTGCATCATATCTCTCATCGTCTCTATCTTCATATCCATTATTTGGTTCCACACAGAACCAATCCTGATATTGTTTCAACAATCACGTGACATTGCCAGAACTGCTGGCCTTTACATGAAGTTTCTTGTCCCAGGAATATTTGCATATGGCTTCTTGCACAATATGTTGAGGTTTCTTCAAACACAATCTGTTGTGGGGCCATTGGTGGTCTTCTCAGCTATTCCACTGTTGGCTCATATTCTTATTGCATATGCCTTGATTCACTGGACAGATCTGAGATTTATAGGTGCTCCTGTGGCAGCTTCTATTTCATTATGGATATCCATTCCTATGTTGGCCATGTATATCAAGTATGCAAAAAAGTTTAAGCAGACATGGACAGGATTTTCAGTTGAGTCATTCCGTTACATATTCATACAGTTGAAGCTGGCCTTGCTCTCTGCAGCAATGATATGGTATttgaaatttgACTTTGATAGCACAAGGGTTTCCAATGAATTGGGAGCAGGCAACCCGGATAAAGCTAAGCAGGCAATGGGTGTCAATCTCAAGCTGTCTCTCCTCcttggtttatgttttgttttggcACTTGAATTTGGCCATGATATCTGGATTCAAATGTTCAGTGATAGTGCCATAATTAAAGAGGAGTTTGCTTCAGTGGCACCTTTACTTGCAATGTCCATACTACTAGATGCTGTCCAAGGTGTCTTGTCAGGGTTTATGGATTGGCCTAATTTGTGGGGTGGCTTGTCAAGCTGGGACTCTCTTACTTTTGTTGACATGGCGTACCAAATGGACTAA 1173 0.422 MQTSRSSDSTLTHFPPLLSHREENPSPRWWNKILDLEEAKRQLLFSLPMFLANLFYYLITLVSVMFAGHLGELQLAGATLANSWFSVTGLAVMVGLTGALETLCGQGFGAKEYRMLGMYLQASCIISLIVSIFISIIWFHTEPILILFQQSRDIARTAGLYMKFLVPGIFAYGFLHNMLRFLQTQSVVGPLVVFSAIPLLAHILIAYALIHWTDLRFIGAPVAASISLWISIPMLAMYIKYAKKFKQTWTGFSVESFRYIFIQLKLALLSAAMIWYLKFDFDSTRVSNELGAGNPDKAKQAMGVNLKLSLLLGLCFVLALEFGHDIWIQMFSDSAIIKEEFASVAPLLAMSILLDAVQGVLSGFMDWPNLWGGLSSWDSLTFVDMAYQMD 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1161 390 CDD MATE_eukaryotic 38 363 IPR045069 GO:0042910|GO:1990961
Ssu8g1161 390 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 274 - -
Ssu8g1161 390 PANTHER MULTIDRUG RESISTANCE PROTEIN 283 363 - -
Ssu8g1161 390 Pfam MatE 48 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ssu8g1161 390 Pfam MatE 283 365 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ssu8g1161 390 PANTHER PROTEIN DETOXIFICATION 20 274 - -
Ssu8g1161 390 PANTHER PROTEIN DETOXIFICATION 283 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1161 Ssu-Chr8 20670539 20675234 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1161 K03327 - gmx:100816310 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1161 8 20670539 20675234 Ssu8g1161 8 20670539 20675234 ECH