Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1157 ATGGAAATCAGCTCAAGGTTTCAAGAAAGAGAGAACCACAACCACCCTTCTCCAATGAACTCTCCAACAAGCAATGTGAGCAACTGCATGAGCAGCAGCAACAGCAATGGCATCCAAATCCCCACACCACCCCTCACTCCCAAGACCATCCCCAGATCTGACTCCAACCCCTACCCTACCACTTTTGTCCAAGCTGACACCTCCACTTTCAAGCAGGTAGTCCAAATGCTAACCGGCTCATCAGAGACCACAAAACAAGCACCCCTACAACCACAAGATCCAGTGCCGCCGCCACCTCCACCGTCCAGAAACTTCAACATCCCCCCCATCAAGACCCCACCAAAGAAGCAGCAAGGCTTCAAGCTCTATGAGAGAAGGAACAGCCTCAAGAACAGCCTCATGCTCAACACCTTGATGCCCAATTTTGCTCACAACTACTCTCCATCCTTCTCACCCAGGAAGCCTGAGATCCTCTCCCCAAGCCTGCTTGACTTCCCCTCCCTTGCTCTCAGCCCTGTCACCCCATTGAATGATGACCCTTTTGACAAGTCCTCACCTTCATTGGGGAACTCATCAGAGGAGGAAAAGGCCATAGCTGAAAAGGGCTTCTACTTGCATCCCTCTCCCATGACCACTCCTAGAGACTCAGAGCCACAGCTCTTGCCTTTGTTCCCAGTGACCTCACCTAGAGTCTCGGAATCACCCTCTTGA 711 0.519 MEISSRFQERENHNHPSPMNSPTSNVSNCMSSSNSNGIQIPTPPLTPKTIPRSDSNPYPTTFVQADTSTFKQVVQMLTGSSETTKQAPLQPQDPVPPPPPPSRNFNIPPIKTPPKKQQGFKLYERRNSLKNSLMLNTLMPNFAHNYSPSFSPRKPEILSPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEEKAIAEKGFYLHPSPMTTPRDSEPQLLPLFPVTSPRVSESPS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1157 236 MobiDBLite consensus disorder prediction 205 236 - -
Ssu8g1157 236 Pfam VQ motif 57 83 IPR008889 -
Ssu8g1157 236 PANTHER VQ MOTIF PROTEIN 1 236 - -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 178 192 - -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 14 43 - -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 176 195 - -
Ssu8g1157 236 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 1 236 IPR039611 -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 1 119 - -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 90 108 - -
Ssu8g1157 236 MobiDBLite consensus disorder prediction 51 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1157 Ssu-Chr8 20596200 20596910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1157 - - gmx:100818804 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1157 8 20596200 20596910 Ssu8g1157 8 20596200 20596910 ECH