Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1153 ATGGCGGTTGAGGTtgtgggatttgagatggtTCAAGGACCTGTGGAGAATGGTGCTGAAGGTGGAAAACCTGTTTTGCATGAGAAGGAGAATGGCAAGCCGGAAAAAGATCTGGGAGCTGCTGAGGCGATCAAATTTGGGACACATGGAGATGAATCTGCCAAAGGGGAAGGGAATGATGTTTCCGATGCGAATGCCCCGAAAGATGCTGTTGAAGAGTGGCCTGCACCTAAGCAGATTCATTCTTTTTACTTTGTCAGGTGGCGGCCTTATGATGATCCAACCATGAAGTCTAAAATTGATCAGCTTGACAAAGAGATTAGCAAGAAAAACCAAGCCCGGTTTCAGATCACTGAAGCGCTGAAGGCAAAGCGGTCTGAGCGAGCCGAGCTGATTTCTCAGATCAAGTCTCTAAGAGGTGACAGTAGGCAATTTCAGAGTATTGTGgctgagaaaataaaagagattgaACCTCTGCAGCAAGCACTGGGCAAGCTGCGCACTGCAAATAATGCGGGTCGGGGTGGTTTGTGTTCATCTGAGGAGGAACTCAATGAAGTTATATATAGTTTACAATACCGCATACAGCATGAGAGCATTCCATTGGCTGAGGAAAAACAACTCCTCCGAGAAATCAAACAGCTTGAGGGGACAAGGGAGAAAGTTATTGCTAATGCTGCAATGAGGGCCAAGTTACAGGAATCTATGGGGCAGAAAGAAGCCATTCAAGATCAGGTTAAGCTTATAGGTGGGGATTTGGATGGAGTGAAGAAAGAAAGACAAGCAATTCGATccaaaatcaatcaaattgaTGATGTACTGAAAACCATAGACAAGGATATCCAGTCCCTACAGGATGAACTGACAGCTGTTTCTCAGAAGAGGGATAAAGCTTTTGAGAGCATGCAGCAGCTTAGAAAACAGCGCGAGGAGGGGAACTCCTATTTCTACCAAAGTCGTACACTTCTGAACAAAGCACGGGAGCTGGCTGCTAAGAAAGATATTAACACCCTTGATGAACTTTCACAGACAGAGGTTGAGAAATTTATGGCACTTTGGAACGGTGACAAAACTTTTAGGAATGATTATGAAAAAAGACTTTTGTCCTCATTGGATATGCGGCAGTTGAGTAGGGATGGACGGATGAGGAACCCAGATGAAAGGCCATTGCTGGAAGAACCAAAACCTGCCGAAACTGATGCATTATCGAAAATTGTCCCAAAACAGCCAAAGGAGGAGCCTAAGCCTTCTCCACAAGAAATTTTGCCTGCTCAGAAAGAATCCAAAAACAAGGGGAAAGATTCGAAATCCAAACCAGACAAGAAGGATTTAGCAGAAACTGATGAATATGAATTTGACATTCCCCGGAAGGAGACCCCTGCCAAAGAGCCTGAAATTGATCTGGCAAAGCTGAAAGAGATGAAAAGAGAGGAGGAAATTGCCAAAGCAAAGCAGGCCttggaaagaaagagaaagttaGCTGAGAAAGCTGCAGCCAAAGCAGCCCTCAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGTGAGAAGAAAGCAAAGAAGAAAGCTTCGGGCAATGCAGCTGTTTCCAACCCTGAGGACGAACCAAAAGATGAAGTTGTCGAGGCTACAGAACCAGAAGAGGTTGATGATGATGTTCAGGCCCCAGATCCAGTGAAGGAAAAGGTCCAAAAGGAGAGTGGCATCCGGTCCAGGGGCCGAGCAAGAGGCTCAGATTCAATTCCAAAAGTTATTCTTAAGCGGAAGAAGTCTAACAATTACTGGGTATGGGCTGCAGCTGCTGCTTTGTTAGTCCTCCTGTTCGTGGTGCTTGGATACATCTATCTTTTCTGA 1857 0.4383 MAVEVVGFEMVQGPVENGAEGGKPVLHEKENGKPEKDLGAAEAIKFGTHGDESAKGEGNDVSDANAPKDAVEEWPAPKQIHSFYFVRWRPYDDPTMKSKIDQLDKEISKKNQARFQITEALKAKRSERAELISQIKSLRGDSRQFQSIVAEKIKEIEPLQQALGKLRTANNAGRGGLCSSEEELNEVIYSLQYRIQHESIPLAEEKQLLREIKQLEGTREKVIANAAMRAKLQESMGQKEAIQDQVKLIGGDLDGVKKERQAIRSKINQIDDVLKTIDKDIQSLQDELTAVSQKRDKAFESMQQLRKQREEGNSYFYQSRTLLNKARELAAKKDINTLDELSQTEVEKFMALWNGDKTFRNDYEKRLLSSLDMRQLSRDGRMRNPDERPLLEEPKPAETDALSKIVPKQPKEEPKPSPQEILPAQKESKNKGKDSKSKPDKKDLAETDEYEFDIPRKETPAKEPEIDLAKLKEMKREEEIAKAKQALERKRKLAEKAAAKAALRAQKEAEKKLKDREKKAKKKASGNAAVSNPEDEPKDEVVEATEPEEVDDDVQAPDPVKEKVQKESGIRSRGRARGSDSIPKVILKRKKSNNYWVWAAAAALLVLLFVVLGYIYLF 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1153 618 MobiDBLite consensus disorder prediction 539 553 - -
Ssu8g1153 618 Coils Coil 476 523 - -
Ssu8g1153 618 PANTHER PROTON PUMP-INTERACTOR 1-LIKE 1 617 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 426 524 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 554 581 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 377 415 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 1 73 - -
Ssu8g1153 618 Coils Coil 267 294 - -
Ssu8g1153 618 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 1 617 - -
Ssu8g1153 618 Coils Coil 205 225 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 22 58 - -
Ssu8g1153 618 Coils Coil 121 141 - -
Ssu8g1153 618 MobiDBLite consensus disorder prediction 377 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1153 Ssu-Chr8 20521001 20525381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1153 - - gmx:100819875 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1153 8 20521001 20525381 Ssu8g1153 8 20521001 20525381 ECH